Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC01554Q52M75 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC01554Q52M75 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 HYI-213ENST00000583037 1322 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC01554Q52M75 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC01554Q52M75 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 H19-210ENST00000439725 1929 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 CD37-213ENST00000598095 1598 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 HYI-210ENST00000486909 905 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC01554Q52M75 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
LINC01554Q52M75 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC10.15□□□□□ -0.79
LINC01554Q52M75 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
LINC01554Q52M75 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC10.15□□□□□ -0.79
LINC01554Q52M75 AL161729.1-201ENST00000604104 1402 ntBASIC10.15□□□□□ -0.79
LINC01554Q52M75 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC10.15□□□□□ -0.79
LINC01554Q52M75 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
LINC01554Q52M75 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
LINC01554Q52M75 GOLGA2P6-201ENST00000340929 2049 ntBASIC10.14□□□□□ -0.79
LINC01554Q52M75 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC01554Q52M75 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms