Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
RFC4P35249 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFC4P35249 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RFC4P35249 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RFC4P35249 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RFC4P35249 MIR1238-201ENST00000408483 83 ntBASIC25.64■■□□□ 1.7
RFC4P35249 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RFC4P35249 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.64■■□□□ 1.7
RFC4P35249 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.64■■□□□ 1.7
RFC4P35249 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RFC4P35249 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
RFC4P35249 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFC4P35249 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFC4P35249 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFC4P35249 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RFC4P35249 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.63■■□□□ 1.69
RFC4P35249 AP002982.1-201ENST00000492365 877 ntBASIC25.63■■□□□ 1.69
RFC4P35249 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.63■■□□□ 1.69
RFC4P35249 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.63■■□□□ 1.69
RFC4P35249 AL031963.3-201ENST00000606441 850 ntBASIC25.63■■□□□ 1.69
RFC4P35249 AC004264.1-201ENST00000608354 794 ntBASIC25.63■■□□□ 1.69
RFC4P35249 LINC01568-207ENST00000641790 1380 ntBASIC25.63■■□□□ 1.69
RFC4P35249 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
RFC4P35249 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFC4P35249 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RFC4P35249 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.63■■□□□ 1.69
RFC4P35249 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.62■■□□□ 1.69
RFC4P35249 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.62■■□□□ 1.69
RFC4P35249 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.62■■□□□ 1.69
RFC4P35249 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
RFC4P35249 AL121906.2-201ENST00000621597 723 ntBASIC25.62■■□□□ 1.69
RFC4P35249 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.62■■□□□ 1.69
RFC4P35249 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFC4P35249 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
RFC4P35249 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.61■■□□□ 1.69
RFC4P35249 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.61■■□□□ 1.69
RFC4P35249 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
RFC4P35249 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RFC4P35249 AC113347.1-201ENST00000413321 391 ntBASIC25.61■■□□□ 1.69
RFC4P35249 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.61■■□□□ 1.69
RFC4P35249 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.61■■□□□ 1.69
RFC4P35249 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RFC4P35249 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFC4P35249 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RFC4P35249 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFC4P35249 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.6■■□□□ 1.69
RFC4P35249 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
RFC4P35249 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.6■■□□□ 1.69
RFC4P35249 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.6■■□□□ 1.69
RFC4P35249 KRT18P57-201ENST00000443599 1254 ntBASIC25.6■■□□□ 1.69
RFC4P35249 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.6■■□□□ 1.69
RFC4P35249 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.6■■□□□ 1.69
RFC4P35249 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.6■■□□□ 1.69
RFC4P35249 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.6■■□□□ 1.69
RFC4P35249 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFC4P35249 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
RFC4P35249 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFC4P35249 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFC4P35249 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RFC4P35249 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFC4P35249 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFC4P35249 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RFC4P35249 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.59■■□□□ 1.69
RFC4P35249 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.59■■□□□ 1.69
RFC4P35249 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFC4P35249 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.59■■□□□ 1.69
RFC4P35249 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.59■■□□□ 1.69
RFC4P35249 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.59■■□□□ 1.69
RFC4P35249 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RFC4P35249 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RFC4P35249 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
RFC4P35249 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RFC4P35249 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.58■■□□□ 1.69
RFC4P35249 NAPSB-206ENST00000562112 1266 ntBASIC25.58■■□□□ 1.69
RFC4P35249 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RFC4P35249 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.58■■□□□ 1.68
RFC4P35249 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RFC4P35249 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RFC4P35249 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RFC4P35249 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.57■■□□□ 1.68
RFC4P35249 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.57■■□□□ 1.68
RFC4P35249 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.57■■□□□ 1.68
RFC4P35249 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RFC4P35249 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
RFC4P35249 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.57■■□□□ 1.68
RFC4P35249 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms