Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCND1P24385 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCND1P24385 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCND1P24385 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCND1P24385 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCND1P24385 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCND1P24385 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCND1P24385 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.33■□□□□ 0.85
CCND1P24385 AC006128.1-201ENST00000624704 1661 ntBASIC20.33■□□□□ 0.85
CCND1P24385 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCND1P24385 TNXA-203ENST00000507684 2038 ntBASIC20.33■□□□□ 0.85
CCND1P24385 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCND1P24385 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CCND1P24385 KRT19P1-201ENST00000405746 1186 ntBASIC20.33■□□□□ 0.85
CCND1P24385 AC010141.2-201ENST00000452426 721 ntBASIC20.33■□□□□ 0.85
CCND1P24385 AC120498.10-201ENST00000621827 505 ntBASIC20.33■□□□□ 0.85
CCND1P24385 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCND1P24385 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCND1P24385 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.33■□□□□ 0.84
CCND1P24385 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CCND1P24385 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCND1P24385 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.33■□□□□ 0.84
CCND1P24385 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCND1P24385 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.32■□□□□ 0.84
CCND1P24385 AP004607.4-201ENST00000530158 1459 ntBASIC20.32■□□□□ 0.84
CCND1P24385 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.32■□□□□ 0.84
CCND1P24385 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.32■□□□□ 0.84
CCND1P24385 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.32■□□□□ 0.84
CCND1P24385 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.32■□□□□ 0.84
CCND1P24385 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.32■□□□□ 0.84
CCND1P24385 AC104187.1-201ENST00000607510 612 ntBASIC20.32■□□□□ 0.84
CCND1P24385 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.32■□□□□ 0.84
CCND1P24385 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCND1P24385 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCND1P24385 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.31■□□□□ 0.84
CCND1P24385 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCND1P24385 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.31■□□□□ 0.84
CCND1P24385 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCND1P24385 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.31■□□□□ 0.84
CCND1P24385 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.31■□□□□ 0.84
CCND1P24385 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.31■□□□□ 0.84
CCND1P24385 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.31■□□□□ 0.84
CCND1P24385 AC087623.3-201ENST00000607047 1098 ntBASIC20.31■□□□□ 0.84
CCND1P24385 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.31■□□□□ 0.84
CCND1P24385 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.31■□□□□ 0.84
CCND1P24385 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCND1P24385 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
CCND1P24385 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 AC116562.4-201ENST00000641316 2276 ntBASIC20.3■□□□□ 0.84
CCND1P24385 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCND1P24385 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCND1P24385 AC004854.2-201ENST00000608450 1441 ntBASIC20.3■□□□□ 0.84
CCND1P24385 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.3■□□□□ 0.84
CCND1P24385 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.3■□□□□ 0.84
CCND1P24385 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCND1P24385 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 AC026271.2-201ENST00000428091 497 ntBASIC20.3■□□□□ 0.84
CCND1P24385 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.3■□□□□ 0.84
CCND1P24385 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.3■□□□□ 0.84
CCND1P24385 KRT18P20-201ENST00000548986 1279 ntBASIC20.3■□□□□ 0.84
CCND1P24385 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.3■□□□□ 0.84
CCND1P24385 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.3■□□□□ 0.84
CCND1P24385 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCND1P24385 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms