Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.91■□□□□ 0.78
CAPN1P07384 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN1P07384 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.91■□□□□ 0.78
CAPN1P07384 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CAPN1P07384 AC013268.1-206ENST00000638368 961 ntBASIC19.91■□□□□ 0.78
CAPN1P07384 AC112229.1-201ENST00000639295 961 ntBASIC19.91■□□□□ 0.78
CAPN1P07384 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN1P07384 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN1P07384 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.91■□□□□ 0.78
CAPN1P07384 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN1P07384 AC068338.2-201ENST00000563278 1430 ntBASIC19.91■□□□□ 0.78
CAPN1P07384 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CAPN1P07384 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CAPN1P07384 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN1P07384 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN1P07384 AC007322.4-201ENST00000509611 723 ntBASIC19.9■□□□□ 0.78
CAPN1P07384 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CAPN1P07384 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CAPN1P07384 AL138781.1-201ENST00000566567 1274 ntBASIC19.9■□□□□ 0.78
CAPN1P07384 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.9■□□□□ 0.78
CAPN1P07384 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CAPN1P07384 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN1P07384 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN1P07384 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CAPN1P07384 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CAPN1P07384 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN1P07384 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CAPN1P07384 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN1P07384 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CAPN1P07384 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN1P07384 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 AF201337.1-201ENST00000520239 748 ntBASIC19.89■□□□□ 0.77
CAPN1P07384 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.89■□□□□ 0.77
CAPN1P07384 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.89■□□□□ 0.77
CAPN1P07384 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN1P07384 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.88■□□□□ 0.77
CAPN1P07384 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CAPN1P07384 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CAPN1P07384 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.88■□□□□ 0.77
CAPN1P07384 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.88■□□□□ 0.77
CAPN1P07384 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.88■□□□□ 0.77
CAPN1P07384 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CAPN1P07384 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CAPN1P07384 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CAPN1P07384 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN1P07384 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.87■□□□□ 0.77
CAPN1P07384 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CAPN1P07384 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 AL512408.1-201ENST00000569378 2000 ntBASIC19.87■□□□□ 0.77
CAPN1P07384 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.87■□□□□ 0.77
CAPN1P07384 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.87■□□□□ 0.77
CAPN1P07384 AC105036.2-201ENST00000569468 176 ntBASIC19.87■□□□□ 0.77
CAPN1P07384 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CAPN1P07384 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.87■□□□□ 0.77
CAPN1P07384 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.87■□□□□ 0.77
CAPN1P07384 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 PCDHAC2-203ENST00000615316 3011 ntBASIC19.87■□□□□ 0.77
CAPN1P07384 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
CAPN1P07384 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.87■□□□□ 0.77
CAPN1P07384 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CAPN1P07384 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.86■□□□□ 0.77
CAPN1P07384 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.86■□□□□ 0.77
CAPN1P07384 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms