Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SSSCA1O60232 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.5■□□□□ 0.23
SSSCA1O60232 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.5■□□□□ 0.23
SSSCA1O60232 AL512631.2-201ENST00000604634 923 ntBASIC16.5■□□□□ 0.23
SSSCA1O60232 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SSSCA1O60232 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSSCA1O60232 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 AC004408.2-201ENST00000623613 2777 ntBASIC16.49■□□□□ 0.23
SSSCA1O60232 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.49■□□□□ 0.23
SSSCA1O60232 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.49■□□□□ 0.23
SSSCA1O60232 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.49■□□□□ 0.23
SSSCA1O60232 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.49■□□□□ 0.23
SSSCA1O60232 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.49■□□□□ 0.23
SSSCA1O60232 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.49■□□□□ 0.23
SSSCA1O60232 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.49■□□□□ 0.23
SSSCA1O60232 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.49■□□□□ 0.23
SSSCA1O60232 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSSCA1O60232 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.49■□□□□ 0.23
SSSCA1O60232 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SSSCA1O60232 AP004607.4-201ENST00000530158 1459 ntBASIC16.48■□□□□ 0.23
SSSCA1O60232 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SSSCA1O60232 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.48■□□□□ 0.23
SSSCA1O60232 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.48■□□□□ 0.23
SSSCA1O60232 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.48■□□□□ 0.23
SSSCA1O60232 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.48■□□□□ 0.23
SSSCA1O60232 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SSSCA1O60232 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SSSCA1O60232 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSSCA1O60232 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.47■□□□□ 0.23
SSSCA1O60232 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
SSSCA1O60232 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.47■□□□□ 0.23
SSSCA1O60232 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SSSCA1O60232 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.47■□□□□ 0.23
SSSCA1O60232 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SSSCA1O60232 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SSSCA1O60232 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.47■□□□□ 0.23
SSSCA1O60232 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.47■□□□□ 0.23
SSSCA1O60232 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.47■□□□□ 0.23
SSSCA1O60232 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SSSCA1O60232 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
SSSCA1O60232 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SSSCA1O60232 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSSCA1O60232 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.46■□□□□ 0.23
SSSCA1O60232 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SSSCA1O60232 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.46■□□□□ 0.23
SSSCA1O60232 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms