Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.37■■□□□ 1.17
TNRC18O15417 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TNRC18O15417 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
TNRC18O15417 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.37■■□□□ 1.17
TNRC18O15417 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TNRC18O15417 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.37■■□□□ 1.17
TNRC18O15417 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.37■■□□□ 1.17
TNRC18O15417 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.37■■□□□ 1.17
TNRC18O15417 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
TNRC18O15417 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.36■■□□□ 1.17
TNRC18O15417 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TNRC18O15417 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 EMBP1-201ENST00000458200 901 ntBASIC22.36■■□□□ 1.17
TNRC18O15417 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.36■■□□□ 1.17
TNRC18O15417 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.36■■□□□ 1.17
TNRC18O15417 AL031985.4-201ENST00000642138 673 ntBASIC22.36■■□□□ 1.17
TNRC18O15417 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.36■■□□□ 1.17
TNRC18O15417 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNRC18O15417 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNRC18O15417 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TNRC18O15417 FAAHP1-202ENST00000446499 1238 ntBASIC22.35■■□□□ 1.17
TNRC18O15417 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TNRC18O15417 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
TNRC18O15417 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.35■■□□□ 1.17
TNRC18O15417 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNRC18O15417 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNRC18O15417 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TNRC18O15417 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22.35■■□□□ 1.17
TNRC18O15417 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.35■■□□□ 1.17
TNRC18O15417 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.35■■□□□ 1.17
TNRC18O15417 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.35■■□□□ 1.17
TNRC18O15417 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.35■■□□□ 1.17
TNRC18O15417 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNRC18O15417 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TNRC18O15417 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNRC18O15417 AC245052.3-201ENST00000450182 901 ntBASIC22.34■■□□□ 1.17
TNRC18O15417 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.34■■□□□ 1.17
TNRC18O15417 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TNRC18O15417 AC092119.3-201ENST00000612618 583 ntBASIC22.34■■□□□ 1.17
TNRC18O15417 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNRC18O15417 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TNRC18O15417 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNRC18O15417 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TNRC18O15417 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TNRC18O15417 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TNRC18O15417 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TNRC18O15417 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TNRC18O15417 MIR3652-201ENST00000579335 131 ntBASIC22.34■■□□□ 1.17
TNRC18O15417 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.34■■□□□ 1.17
TNRC18O15417 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNRC18O15417 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.33■■□□□ 1.17
TNRC18O15417 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.33■■□□□ 1.17
TNRC18O15417 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.33■■□□□ 1.17
TNRC18O15417 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.33■■□□□ 1.17
TNRC18O15417 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNRC18O15417 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.33■■□□□ 1.17
TNRC18O15417 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.33■■□□□ 1.16
TNRC18O15417 DGCR10-201ENST00000609839 495 ntBASIC22.33■■□□□ 1.16
TNRC18O15417 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TNRC18O15417 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.16
TNRC18O15417 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
TNRC18O15417 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
TNRC18O15417 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TNRC18O15417 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.32■■□□□ 1.16
TNRC18O15417 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TNRC18O15417 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.32■■□□□ 1.16
TNRC18O15417 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
TNRC18O15417 PRELID1P1-202ENST00000567272 903 ntBASIC22.32■■□□□ 1.16
TNRC18O15417 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
TNRC18O15417 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TNRC18O15417 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TNRC18O15417 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.32■■□□□ 1.16
TNRC18O15417 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
TNRC18O15417 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
TNRC18O15417 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
TNRC18O15417 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNRC18O15417 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.31■■□□□ 1.16
TNRC18O15417 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNRC18O15417 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNRC18O15417 AC117500.6-201ENST00000624871 588 ntBASIC22.31■■□□□ 1.16
TNRC18O15417 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNRC18O15417 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNRC18O15417 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.31■■□□□ 1.16
TNRC18O15417 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
TNRC18O15417 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.31■■□□□ 1.16
TNRC18O15417 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TNRC18O15417 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms