Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA2A8K830 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA2A8K830 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA2A8K830 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA2A8K830 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA2A8K830 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.65■□□□□ 0.1
COLCA2A8K830 AC093536.1-201ENST00000569153 554 ntBASIC15.65■□□□□ 0.1
COLCA2A8K830 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA2A8K830 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
COLCA2A8K830 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COLCA2A8K830 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLCA2A8K830 TMEM179-206ENST00000616017 1645 ntBASIC15.65■□□□□ 0.1
COLCA2A8K830 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
COLCA2A8K830 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
COLCA2A8K830 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
COLCA2A8K830 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
COLCA2A8K830 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.64■□□□□ 0.09
COLCA2A8K830 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.64■□□□□ 0.09
COLCA2A8K830 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.64■□□□□ 0.09
COLCA2A8K830 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.64■□□□□ 0.09
COLCA2A8K830 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.64■□□□□ 0.09
COLCA2A8K830 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.64■□□□□ 0.09
COLCA2A8K830 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
COLCA2A8K830 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COLCA2A8K830 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA2A8K830 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.63■□□□□ 0.09
COLCA2A8K830 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.63■□□□□ 0.09
COLCA2A8K830 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
COLCA2A8K830 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.63■□□□□ 0.09
COLCA2A8K830 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA2A8K830 AC079089.2-201ENST00000531211 1277 ntBASIC15.63■□□□□ 0.09
COLCA2A8K830 AC090164.3-201ENST00000610780 2143 ntBASIC15.63■□□□□ 0.09
COLCA2A8K830 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA2A8K830 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.63■□□□□ 0.09
COLCA2A8K830 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA2A8K830 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.63■□□□□ 0.09
COLCA2A8K830 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA2A8K830 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
COLCA2A8K830 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
COLCA2A8K830 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA2A8K830 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.62■□□□□ 0.09
COLCA2A8K830 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
COLCA2A8K830 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COLCA2A8K830 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.61■□□□□ 0.09
COLCA2A8K830 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COLCA2A8K830 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
COLCA2A8K830 AC026202.3-201ENST00000600805 1127 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms