Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.234e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-206ENST00000553413 568 ntTSL 513.63□□□□□ -0.234e-6■■□□□ 13.3
PRPF8Q6P2Q9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.234e-6■■□□□ 13.3
PRPF8Q6P2Q9 STK10-208ENST00000519269 519 ntTSL 413.58□□□□□ -0.244e-6■■□□□ 13.3
PRPF8Q6P2Q9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.53□□□□□ -0.244e-6■■□□□ 13.3
PRPF8Q6P2Q9 ST3GAL6-211ENST00000477574 489 ntTSL 313.4□□□□□ -0.264e-6■■□□□ 13.3
PRPF8Q6P2Q9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.272e-7■■□□□ 13.3
PRPF8Q6P2Q9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.274e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-206ENST00000412894 832 ntTSL 513.3□□□□□ -0.284e-6■■□□□ 13.3
PRPF8Q6P2Q9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.284e-6■■□□□ 13.3
PRPF8Q6P2Q9 GNB3-207ENST00000541978 962 ntTSL 213.24□□□□□ -0.298e-15■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.19□□□□□ -0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 MYH10-206ENST00000465458 799 ntTSL 213.18□□□□□ -0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 GATB-208ENST00000511538 1345 ntTSL 213.18□□□□□ -0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-217ENST00000591823 803 ntTSL 213.17□□□□□ -0.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 GNB3-206ENST00000541257 761 ntTSL 513□□□□□ -0.338e-15■■□□□ 13.3
PRPF8Q6P2Q9 RBM4-209ENST00000515838 943 ntTSL 213□□□□□ -0.334e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-212ENST00000573780 531 ntTSL 412.87□□□□□ -0.352e-11■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-213ENST00000566756 1950 ntTSL 212.85□□□□□ -0.354e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.364e-6■■□□□ 13.3
PRPF8Q6P2Q9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.364e-6■■□□□ 13.3
PRPF8Q6P2Q9 STAT3-212ENST00000588065 571 ntTSL 412.78□□□□□ -0.364e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.374e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.372e-11■■□□□ 13.3
PRPF8Q6P2Q9 COL16A1-211ENST00000479100 740 ntTSL 512.61□□□□□ -0.392e-6■■□□□ 13.3
PRPF8Q6P2Q9 COL16A1-208ENST00000468459 620 ntTSL 512.47□□□□□ -0.412e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.45□□□□□ -0.424e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.42□□□□□ -0.424e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.434e-6■■□□□ 13.3
PRPF8Q6P2Q9 INO80C-201ENST00000283410 789 ntTSL 312.36□□□□□ -0.434e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.25□□□□□ -0.454e-6■■□□□ 13.3
PRPF8Q6P2Q9 MKNK1-208ENST00000468852 584 ntTSL 312.23□□□□□ -0.454e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.474e-6■■□□□ 13.3
PRPF8Q6P2Q9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.494e-6■■□□□ 13.3
PRPF8Q6P2Q9 ARSK-205ENST00000513814 1958 ntTSL 1 (best)12□□□□□ -0.494e-6■■□□□ 13.3
PRPF8Q6P2Q9 TBC1D10A-205ENST00000433426 2021 ntTSL 511.99□□□□□ -0.494e-6■■□□□ 13.3
PRPF8Q6P2Q9 JADE1-212ENST00000514740 532 ntTSL 411.93□□□□□ -0.54e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-213ENST00000440318 441 ntTSL 511.91□□□□□ -0.54e-6■■□□□ 13.3
PRPF8Q6P2Q9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.52e-11■■□□□ 13.3
PRPF8Q6P2Q9 C14orf159-225ENST00000522837 558 ntTSL 411.88□□□□□ -0.514e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.512e-11■■□□□ 13.3
PRPF8Q6P2Q9 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.524e-6■■□□□ 13.3
PRPF8Q6P2Q9 MKNK1-218ENST00000525888 588 ntTSL 411.75□□□□□ -0.534e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.68□□□□□ -0.542e-11■■□□□ 13.3
PRPF8Q6P2Q9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.564e-6■■□□□ 13.3
PRPF8Q6P2Q9 ARSK-203ENST00000504873 1920 ntTSL 1 (best)11.55□□□□□ -0.564e-6■■□□□ 13.3
PRPF8Q6P2Q9 AC004997.1-204ENST00000418047 1781 ntTSL 211.49□□□□□ -0.574e-6■■□□□ 13.3
PRPF8Q6P2Q9 AC004997.1-203ENST00000434291 1818 ntAPPRIS P1 TSL 211.41□□□□□ -0.584e-6■■□□□ 13.3
PRPF8Q6P2Q9 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.594e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-231ENST00000556579 565 ntTSL 211.28□□□□□ -0.64e-6■■□□□ 13.3
PRPF8Q6P2Q9 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.24□□□□□ -0.614e-6■■□□□ 13.3
PRPF8Q6P2Q9 TBC1D10A-202ENST00000393906 578 ntTSL 511.22□□□□□ -0.614e-6■■□□□ 13.3
PRPF8Q6P2Q9 LAMA5-205ENST00000464134 637 ntTSL 211.22□□□□□ -0.611e-11■■□□□ 13.3
PRPF8Q6P2Q9 LBHD1-203ENST00000415855 821 ntAPPRIS ALT2 TSL 311.21□□□□□ -0.611e-7■■□□□ 13.3
PRPF8Q6P2Q9 CUL9-214ENST00000512408 677 ntTSL 311.04□□□□□ -0.644e-6■■□□□ 13.3
PRPF8Q6P2Q9 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC10.9□□□□□ -0.664e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZNF384-209ENST00000537383 672 ntTSL 310.84□□□□□ -0.672e-11■■□□□ 13.3
PRPF8Q6P2Q9 HECTD3-206ENST00000486296 812 ntTSL 510.83□□□□□ -0.684e-6■■□□□ 13.3
PRPF8Q6P2Q9 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.694e-6■■□□□ 13.3
PRPF8Q6P2Q9 GATB-202ENST00000503160 1860 ntTSL 510.71□□□□□ -0.694e-6■■□□□ 13.3
PRPF8Q6P2Q9 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.724e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-210ENST00000553769 560 ntTSL 410.5□□□□□ -0.734e-6■■□□□ 13.3
PRPF8Q6P2Q9 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.752e-6■■□□□ 13.3
PRPF8Q6P2Q9 CUL9-207ENST00000504485 641 ntTSL 310.27□□□□□ -0.774e-6■■□□□ 13.3
PRPF8Q6P2Q9 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC10.21□□□□□ -0.773e-8■■□□□ 13.3
PRPF8Q6P2Q9 FAM3A-221ENST00000612856 3995 ntTSL 210.14□□□□□ -0.794e-6■■□□□ 13.3
PRPF8Q6P2Q9 KCTD6-206ENST00000491093 408 ntTSL 510□□□□□ -0.814e-6■■□□□ 13.3
PRPF8Q6P2Q9 MR1-202ENST00000367578 1577 ntTSL 29.96□□□□□ -0.814e-6■■□□□ 13.3
PRPF8Q6P2Q9 CBR4-207ENST00000510042 1198 ntTSL 29.83□□□□□ -0.843e-8■■□□□ 13.3
PRPF8Q6P2Q9 TBC1D10A-207ENST00000462073 5562 ntTSL 29.8□□□□□ -0.844e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZNF3-213ENST00000479192 640 ntTSL 29.78□□□□□ -0.844e-6■■□□□ 13.3
PRPF8Q6P2Q9 ABHD2-209ENST00000569411 558 ntTSL 59.71□□□□□ -0.867e-7■■□□□ 13.3
PRPF8Q6P2Q9 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.862e-7■■□□□ 13.3
PRPF8Q6P2Q9 CNDP2-223ENST00000583695 559 ntTSL 49.64□□□□□ -0.872e-6■■□□□ 13.3
PRPF8Q6P2Q9 ARSK-201ENST00000380009 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.874e-6■■□□□ 13.3
PRPF8Q6P2Q9 WARS-208ENST00000553545 591 ntTSL 49.57□□□□□ -0.884e-6■■□□□ 13.3
PRPF8Q6P2Q9 MR1-207ENST00000486453 749 ntTSL 39.56□□□□□ -0.884e-6■■□□□ 13.3
PRPF8Q6P2Q9 LBHD1-205ENST00000524759 579 ntTSL 49.56□□□□□ -0.881e-7■■□□□ 13.3
PRPF8Q6P2Q9 TMEM201-204ENST00000508400 893 ntTSL 59.54□□□□□ -0.882e-11■■□□□ 13.3
PRPF8Q6P2Q9 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC9.53□□□□□ -0.884e-6■■□□□ 13.3
PRPF8Q6P2Q9 OSBPL10-210ENST00000467647 1078 ntTSL 39.37□□□□□ -0.914e-6■■□□□ 13.3
PRPF8Q6P2Q9 STK10-211ENST00000520476 994 ntTSL 29.3□□□□□ -0.924e-6■■□□□ 13.3
PRPF8Q6P2Q9 C14orf159-206ENST00000517362 583 ntTSL 49.2□□□□□ -0.944e-6■■□□□ 13.3
PRPF8Q6P2Q9 CCDC189-208ENST00000544613 555 ntTSL 39.2□□□□□ -0.944e-6■■□□□ 13.3
PRPF8Q6P2Q9 CHKB-211ENST00000489453 722 ntTSL 29.17□□□□□ -0.944e-6■■□□□ 13.3
PRPF8Q6P2Q9 CNDP2-226ENST00000584581 4523 ntTSL 29.17□□□□□ -0.942e-6■■□□□ 13.3
PRPF8Q6P2Q9 CNDP2-202ENST00000324301 2349 ntTSL 1 (best) BASIC9.11□□□□□ -0.952e-6■■□□□ 13.3
PRPF8Q6P2Q9 ACADVL-234ENST00000583760 599 ntTSL 29.09□□□□□ -0.954e-6■■□□□ 13.3
PRPF8Q6P2Q9 ARPC1A-203ENST00000463009 719 ntTSL 39.08□□□□□ -0.964e-6■■□□□ 13.3
PRPF8Q6P2Q9 MR1-203ENST00000367579 1154 ntTSL 1 (best) BASIC8.92□□□□□ -0.984e-6■■□□□ 13.3
PRPF8Q6P2Q9 COG8-204ENST00000567493 712 ntTSL 58.92□□□□□ -0.984e-6■■□□□ 13.3
PRPF8Q6P2Q9 GATB-203ENST00000505211 697 ntTSL 58.91□□□□□ -0.984e-6■■□□□ 13.3
PRPF8Q6P2Q9 STK10-216ENST00000523615 672 ntTSL 38.88□□□□□ -0.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 HECTD3-203ENST00000466423 914 ntTSL 38.87□□□□□ -0.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 HECTD3-207ENST00000487488 593 ntTSL 38.87□□□□□ -0.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZNF234-203ENST00000590795 663 ntTSL 38.86□□□□□ -0.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 SP2-203ENST00000635868 342 ntTSL 58.86□□□□□ -0.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 TMEM201-203ENST00000416541 3447 ntTSL 1 (best)8.79□□□□□ -12e-11■■□□□ 13.3
PRPF8Q6P2Q9 RTF1-202ENST00000462276 485 ntTSL 48.69□□□□□ -1.024e-6■■□□□ 13.3
PRPF8Q6P2Q9 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC8.63□□□□□ -1.034e-6■■□□□ 13.3
Retrieved 100 of 73,762 protein–RNA pairs in 1262.8 ms