RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 NISCHQ9Y2I1 1504 aa26.58■■□□□ 1.85
CCDC189-208ENST00000544613 CCDC180Q9P1Z9 1646 aa23.03■■□□□ 1.28
CCDC189-208ENST00000544613 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
CCDC189-208ENST00000544613 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
CCDC189-208ENST00000544613 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
CCDC189-208ENST00000544613 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
CCDC189-208ENST00000544613 DCAF8L2P0C7V8 631 aa21.68■■□□□ 1.06
CCDC189-208ENST00000544613 NACADO15069 1562 aa21.41■■□□□ 1.02
CCDC189-208ENST00000544613 ABCC9O60706 1549 aa21.3■■□□□ 1
CCDC189-208ENST00000544613 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
CCDC189-208ENST00000544613 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
CCDC189-208ENST00000544613 SCRIBQ14160 1630 aa21.08■□□□□ 0.97
CCDC189-208ENST00000544613 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
CCDC189-208ENST00000544613 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
CCDC189-208ENST00000544613 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
CCDC189-208ENST00000544613 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
CCDC189-208ENST00000544613 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
CCDC189-208ENST00000544613 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
CCDC189-208ENST00000544613 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
CCDC189-208ENST00000544613 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
CCDC189-208ENST00000544613 WIZO95785 1651 aa20.27■□□□□ 0.84
CCDC189-208ENST00000544613 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
CCDC189-208ENST00000544613 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC189-208ENST00000544613 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
CCDC189-208ENST00000544613 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
CCDC189-208ENST00000544613 SMARCA2P51531 1590 aa19.98■□□□□ 0.79
CCDC189-208ENST00000544613 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
CCDC189-208ENST00000544613 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
CCDC189-208ENST00000544613 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
CCDC189-208ENST00000544613 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
CCDC189-208ENST00000544613 NCAPD3P42695 1498 aa19.75■□□□□ 0.75
CCDC189-208ENST00000544613 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
CCDC189-208ENST00000544613 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
CCDC189-208ENST00000544613 EEA1Q15075 1411 aa19.59■□□□□ 0.73
CCDC189-208ENST00000544613 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
CCDC189-208ENST00000544613 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
CCDC189-208ENST00000544613 FAM9AQ8IZU1 332 aaPredicted RBP19.47■□□□□ 0.71
CCDC189-208ENST00000544613 CFTRP13569 1480 aa19.39■□□□□ 0.69
CCDC189-208ENST00000544613 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
CCDC189-208ENST00000544613 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
CCDC189-208ENST00000544613 SOGA1O94964 1423 aa19.32■□□□□ 0.68
CCDC189-208ENST00000544613 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
CCDC189-208ENST00000544613 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
CCDC189-208ENST00000544613 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
CCDC189-208ENST00000544613 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
CCDC189-208ENST00000544613 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
CCDC189-208ENST00000544613 TRIM26Q12899 539 aaPredicted RBP19.24■□□□□ 0.67
CCDC189-208ENST00000544613 GOLGA3Q08378 1498 aa19.22■□□□□ 0.67
CCDC189-208ENST00000544613 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
CCDC189-208ENST00000544613 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
CCDC189-208ENST00000544613 KIF21BO75037 1637 aa19.19■□□□□ 0.66
CCDC189-208ENST00000544613 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
CCDC189-208ENST00000544613 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
CCDC189-208ENST00000544613 CUX1P39880 1505 aa19.13■□□□□ 0.65
CCDC189-208ENST00000544613 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
CCDC189-208ENST00000544613 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
CCDC189-208ENST00000544613 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
CCDC189-208ENST00000544613 KIF27Q86VH2 1401 aa19.06■□□□□ 0.64
CCDC189-208ENST00000544613 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
CCDC189-208ENST00000544613 HRCP23327 699 aa19.03■□□□□ 0.64
CCDC189-208ENST00000544613 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
CCDC189-208ENST00000544613 PRXQ9BXM0 1461 aa18.99■□□□□ 0.63
CCDC189-208ENST00000544613 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
CCDC189-208ENST00000544613 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
CCDC189-208ENST00000544613 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
CCDC189-208ENST00000544613 CLIP1P30622 1438 aa18.9■□□□□ 0.62
CCDC189-208ENST00000544613 FGD5Q6ZNL6 1462 aa18.88■□□□□ 0.61
CCDC189-208ENST00000544613 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
CCDC189-208ENST00000544613 CUX2O14529 1486 aa18.84■□□□□ 0.61
CCDC189-208ENST00000544613 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
CCDC189-208ENST00000544613 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
CCDC189-208ENST00000544613 IGF1RP08069 1367 aa18.81■□□□□ 0.6
CCDC189-208ENST00000544613 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
CCDC189-208ENST00000544613 NESP48681 1621 aa18.79■□□□□ 0.6
CCDC189-208ENST00000544613 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
CCDC189-208ENST00000544613 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
CCDC189-208ENST00000544613 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
CCDC189-208ENST00000544613 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
CCDC189-208ENST00000544613 APLP2Q06481 763 aa18.67■□□□□ 0.58
CCDC189-208ENST00000544613 CUL7Q14999 1698 aa18.64■□□□□ 0.57
CCDC189-208ENST00000544613 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
CCDC189-208ENST00000544613 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
CCDC189-208ENST00000544613 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
CCDC189-208ENST00000544613 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
CCDC189-208ENST00000544613 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
CCDC189-208ENST00000544613 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
CCDC189-208ENST00000544613 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
CCDC189-208ENST00000544613 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
CCDC189-208ENST00000544613 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
CCDC189-208ENST00000544613 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
CCDC189-208ENST00000544613 MAP3K1Q13233 1512 aa18.51■□□□□ 0.55
CCDC189-208ENST00000544613 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
CCDC189-208ENST00000544613 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
CCDC189-208ENST00000544613 TARBP1Q13395 1621 aaKnown RBP18.48■□□□□ 0.55
CCDC189-208ENST00000544613 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
CCDC189-208ENST00000544613 WDR62O43379 1518 aa18.44■□□□□ 0.54
CCDC189-208ENST00000544613 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
CCDC189-208ENST00000544613 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
CCDC189-208ENST00000544613 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.543e-7■■■■■ 36.6
CCDC189-208ENST00000544613 CTTNBP2Q8WZ74 1663 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms