RNA–Protein interactions for RNA: ENST00000505211.5

GATB-203, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 5

Gene GATB, Length 697 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-203ENST00000505211 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
GATB-203ENST00000505211 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
GATB-203ENST00000505211 ABCC9O60706 1549 aa22.32■■□□□ 1.16
GATB-203ENST00000505211 DCAF8L2P0C7V8 631 aa21.76■■□□□ 1.07
GATB-203ENST00000505211 ZCCHC6Q5VYS8 1495 aaKnown RBP21.62■■□□□ 1.05
GATB-203ENST00000505211 NACADO15069 1562 aa21.57■■□□□ 1.04
GATB-203ENST00000505211 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
GATB-203ENST00000505211 RB1CC1Q8TDY2 1594 aa21.5■■□□□ 1.03
GATB-203ENST00000505211 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
GATB-203ENST00000505211 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
GATB-203ENST00000505211 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
GATB-203ENST00000505211 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
GATB-203ENST00000505211 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
GATB-203ENST00000505211 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
GATB-203ENST00000505211 DNAJC5BQ9UF47 199 aa20.49■□□□□ 0.87
GATB-203ENST00000505211 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
GATB-203ENST00000505211 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
GATB-203ENST00000505211 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
GATB-203ENST00000505211 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
GATB-203ENST00000505211 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
GATB-203ENST00000505211 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
GATB-203ENST00000505211 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
GATB-203ENST00000505211 ATAD2BQ9ULI0 1458 aa19.98■□□□□ 0.79
GATB-203ENST00000505211 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
GATB-203ENST00000505211 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
GATB-203ENST00000505211 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
GATB-203ENST00000505211 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
GATB-203ENST00000505211 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
GATB-203ENST00000505211 WIZO95785 1651 aa19.68■□□□□ 0.74
GATB-203ENST00000505211 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
GATB-203ENST00000505211 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
GATB-203ENST00000505211 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
GATB-203ENST00000505211 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
GATB-203ENST00000505211 NESP48681 1621 aa19.36■□□□□ 0.69
GATB-203ENST00000505211 CFTRP13569 1480 aa19.31■□□□□ 0.68
GATB-203ENST00000505211 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
GATB-203ENST00000505211 PDS5BQ9NTI5 1447 aa19.3■□□□□ 0.68
GATB-203ENST00000505211 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
GATB-203ENST00000505211 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
GATB-203ENST00000505211 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
GATB-203ENST00000505211 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
GATB-203ENST00000505211 CUX2O14529 1486 aa18.98■□□□□ 0.63
GATB-203ENST00000505211 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
GATB-203ENST00000505211 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
GATB-203ENST00000505211 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
GATB-203ENST00000505211 WDR62O43379 1518 aa18.9■□□□□ 0.62
GATB-203ENST00000505211 ABCC8Q09428 1581 aa18.89■□□□□ 0.62
GATB-203ENST00000505211 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
GATB-203ENST00000505211 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
GATB-203ENST00000505211 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
GATB-203ENST00000505211 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
GATB-203ENST00000505211 CUX1P39880 1505 aa18.72■□□□□ 0.59
GATB-203ENST00000505211 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
GATB-203ENST00000505211 SOGA1O94964 1423 aa18.69■□□□□ 0.58
GATB-203ENST00000505211 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
GATB-203ENST00000505211 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
GATB-203ENST00000505211 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
GATB-203ENST00000505211 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
GATB-203ENST00000505211 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
GATB-203ENST00000505211 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
GATB-203ENST00000505211 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
GATB-203ENST00000505211 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
GATB-203ENST00000505211 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
GATB-203ENST00000505211 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
GATB-203ENST00000505211 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
GATB-203ENST00000505211 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
GATB-203ENST00000505211 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
GATB-203ENST00000505211 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
GATB-203ENST00000505211 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
GATB-203ENST00000505211 GRIN2BQ13224 1484 aa18.4■□□□□ 0.54
GATB-203ENST00000505211 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
GATB-203ENST00000505211 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
GATB-203ENST00000505211 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
GATB-203ENST00000505211 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
GATB-203ENST00000505211 CHMP7Q8WUX9 453 aaPredicted RBP18.35■□□□□ 0.53
GATB-203ENST00000505211 FBLN2P98095 1184 aa18.34■□□□□ 0.53
GATB-203ENST00000505211 IGF1RP08069 1367 aa18.33■□□□□ 0.53
GATB-203ENST00000505211 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
GATB-203ENST00000505211 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
GATB-203ENST00000505211 ABCA5Q8WWZ7 1642 aa18.3■□□□□ 0.52
GATB-203ENST00000505211 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
GATB-203ENST00000505211 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
GATB-203ENST00000505211 SYNJ2O15056 1496 aa18.25■□□□□ 0.51
GATB-203ENST00000505211 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
GATB-203ENST00000505211 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
GATB-203ENST00000505211 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
GATB-203ENST00000505211 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
GATB-203ENST00000505211 GRIN2AQ12879 1464 aa18.13■□□□□ 0.49
GATB-203ENST00000505211 EEA1Q15075 1411 aa18.12■□□□□ 0.49
GATB-203ENST00000505211 ADAMTS12P58397 1594 aa18.1■□□□□ 0.49
GATB-203ENST00000505211 NUP160Q12769 1436 aa18.08■□□□□ 0.49
GATB-203ENST00000505211 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
GATB-203ENST00000505211 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
GATB-203ENST00000505211 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
GATB-203ENST00000505211 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
GATB-203ENST00000505211 CHD1O14646 1710 aa18.03■□□□□ 0.48
GATB-203ENST00000505211 CUL7Q14999 1698 aa18.03■□□□□ 0.48
GATB-203ENST00000505211 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
GATB-203ENST00000505211 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
GATB-203ENST00000505211 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms