Protein–RNA interactions for Protein: Q9BY65

NPCDR1, Nasopharyngeal carcinoma down-regulated gene protein 1, humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPCDR1Q9BY65 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.05■□□□□ 0.16
NPCDR1Q9BY65 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 AC004408.2-201ENST00000623613 2777 ntBASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 AC005332.7-201ENST00000614046 2005 ntBASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 EEF1DP3-203ENST00000566025 782 ntBASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 AC053503.5-201ENST00000601508 636 ntBASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPCDR1Q9BY65 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 BX842568.3-201ENST00000418104 571 ntBASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPCDR1Q9BY65 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPCDR1Q9BY65 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPCDR1Q9BY65 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPCDR1Q9BY65 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
NPCDR1Q9BY65 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPCDR1Q9BY65 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.02■□□□□ 0.15
NPCDR1Q9BY65 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPCDR1Q9BY65 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 TMEM179-206ENST00000616017 1645 ntBASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 IGHV3-19-201ENST00000521488 291 ntBASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 MIR2861-201ENST00000636310 90 ntBASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPCDR1Q9BY65 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms