Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC01560Q8TB33 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC01560Q8TB33 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC01560Q8TB33 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 KRT17P2-201ENST00000300992 1314 ntBASIC17.64■□□□□ 0.41
LINC01560Q8TB33 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC01560Q8TB33 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.63■□□□□ 0.41
LINC01560Q8TB33 AL049637.2-201ENST00000641778 930 ntBASIC17.63■□□□□ 0.41
LINC01560Q8TB33 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01560Q8TB33 AC011484.1-201ENST00000377652 1995 ntBASIC17.62■□□□□ 0.41
LINC01560Q8TB33 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 PRKY-204ENST00000533551 1019 ntBASIC17.62■□□□□ 0.41
LINC01560Q8TB33 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 AP001412.1-201ENST00000608405 714 ntBASIC17.62■□□□□ 0.41
LINC01560Q8TB33 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01560Q8TB33 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 BX088651.1-201ENST00000540551 451 ntBASIC17.61■□□□□ 0.41
LINC01560Q8TB33 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LINC01560Q8TB33 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01560Q8TB33 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms