Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 KRT8P36-201ENST00000489121 1440 ntBASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 AC116562.4-201ENST00000641316 2276 ntBASIC21.8■■□□□ 1.08
CCDC170Q8IYT3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC170Q8IYT3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC170Q8IYT3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC170Q8IYT3 IRS3P-201ENST00000223076 1006 ntBASIC21.79■■□□□ 1.08
CCDC170Q8IYT3 SUDS3P1-201ENST00000505831 966 ntBASIC21.79■■□□□ 1.08
CCDC170Q8IYT3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC170Q8IYT3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC170Q8IYT3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 TMEM179-206ENST00000616017 1645 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4L2-201ENST00000561772 1275 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4L6-201ENST00000626483 1275 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4L1-201ENST00000627662 1275 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4L8-201ENST00000629013 1275 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4L3-201ENST00000630187 1275 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4L7-201ENST00000630678 1275 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 DUX4L5-201ENST00000630834 1275 ntBASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC170Q8IYT3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 BX323043.1-201ENST00000641006 1765 ntBASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 AL158211.5-201ENST00000623583 2518 ntBASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC170Q8IYT3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC170Q8IYT3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC170Q8IYT3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 SLC7A5P2-201ENST00000553010 536 ntBASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 MIR6084-201ENST00000622012 110 ntBASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC170Q8IYT3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 DPP3P2-201ENST00000416030 1696 ntBASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC170Q8IYT3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC170Q8IYT3 AC018445.3-201ENST00000624177 1945 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms