Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 NAPSB-206ENST00000562112 1266 ntBASIC28.59■■■□□ 2.17
CHD2O14647 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC28.59■■■□□ 2.17
CHD2O14647 KRT16P1-201ENST00000399124 1418 ntBASIC28.59■■■□□ 2.17
CHD2O14647 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CHD2O14647 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
CHD2O14647 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC28.58■■■□□ 2.17
CHD2O14647 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC28.58■■■□□ 2.17
CHD2O14647 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC28.58■■■□□ 2.17
CHD2O14647 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC28.58■■■□□ 2.17
CHD2O14647 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC28.58■■■□□ 2.17
CHD2O14647 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CHD2O14647 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC28.58■■■□□ 2.17
CHD2O14647 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
CHD2O14647 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CHD2O14647 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC28.58■■■□□ 2.17
CHD2O14647 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC28.58■■■□□ 2.16
CHD2O14647 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CHD2O14647 AC023632.3-201ENST00000521633 145 ntBASIC28.57■■■□□ 2.16
CHD2O14647 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
CHD2O14647 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
CHD2O14647 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC28.57■■■□□ 2.16
CHD2O14647 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC28.57■■■□□ 2.16
CHD2O14647 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD2O14647 AC104076.2-201ENST00000448912 469 ntBASIC28.57■■■□□ 2.16
CHD2O14647 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC28.57■■■□□ 2.16
CHD2O14647 AC006011.2-201ENST00000621313 1158 ntBASIC28.57■■■□□ 2.16
CHD2O14647 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC28.57■■■□□ 2.16
CHD2O14647 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC28.57■■■□□ 2.16
CHD2O14647 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC28.56■■■□□ 2.16
CHD2O14647 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC28.56■■■□□ 2.16
CHD2O14647 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CHD2O14647 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC28.56■■■□□ 2.16
CHD2O14647 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
CHD2O14647 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CHD2O14647 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.56■■■□□ 2.16
CHD2O14647 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CHD2O14647 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHD2O14647 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC28.55■■■□□ 2.16
CHD2O14647 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CHD2O14647 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC28.55■■■□□ 2.16
CHD2O14647 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
CHD2O14647 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC28.55■■■□□ 2.16
CHD2O14647 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHD2O14647 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
CHD2O14647 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC28.55■■■□□ 2.16
CHD2O14647 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC28.55■■■□□ 2.16
CHD2O14647 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CHD2O14647 USF2-205ENST00000594064 1179 ntTSL 2 BASIC28.55■■■□□ 2.16
CHD2O14647 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHD2O14647 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHD2O14647 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD2O14647 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD2O14647 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHD2O14647 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC28.54■■■□□ 2.16
CHD2O14647 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD2O14647 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.54■■■□□ 2.16
CHD2O14647 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD2O14647 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CHD2O14647 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
CHD2O14647 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC28.53■■■□□ 2.16
CHD2O14647 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHD2O14647 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHD2O14647 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CHD2O14647 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
CHD2O14647 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.53■■■□□ 2.16
CHD2O14647 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CHD2O14647 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
CHD2O14647 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHD2O14647 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHD2O14647 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC28.53■■■□□ 2.16
CHD2O14647 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC28.53■■■□□ 2.16
CHD2O14647 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC28.53■■■□□ 2.16
CHD2O14647 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
CHD2O14647 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD2O14647 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD2O14647 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD2O14647 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CHD2O14647 AP002982.1-201ENST00000492365 877 ntBASIC28.52■■■□□ 2.16
CHD2O14647 TMA16-209ENST00000513272 803 ntTSL 2 BASIC28.52■■■□□ 2.16
CHD2O14647 PNN-205ENST00000556530 601 ntTSL 2 BASIC28.52■■■□□ 2.16
CHD2O14647 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC28.52■■■□□ 2.16
CHD2O14647 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CHD2O14647 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
CHD2O14647 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CHD2O14647 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD2O14647 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC28.51■■■□□ 2.15
CHD2O14647 KSR1P1-201ENST00000446298 240 ntBASIC28.51■■■□□ 2.15
CHD2O14647 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC28.51■■■□□ 2.15
CHD2O14647 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD2O14647 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CHD2O14647 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC28.51■■■□□ 2.15
CHD2O14647 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD2O14647 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD2O14647 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD2O14647 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CHD2O14647 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD2O14647 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD2O14647 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC28.5■■■□□ 2.15
CHD2O14647 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC28.5■■■□□ 2.15
CHD2O14647 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms