Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 AC142381.2-201ENST00000566120 298 ntBASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 AL358852.1-201ENST00000623174 1268 ntBASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB4Q9UN71 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 EEF1DP3-203ENST00000566025 782 ntBASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 AP004607.4-201ENST00000530158 1459 ntBASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGB4Q9UN71 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGB4Q9UN71 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 AC008175.2-201ENST00000612840 297 ntBASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGB4Q9UN71 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
PCDHGB4Q9UN71 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PCDHGB4Q9UN71 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB4Q9UN71 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGB4Q9UN71 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB4Q9UN71 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB4Q9UN71 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB4Q9UN71 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB4Q9UN71 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGB4Q9UN71 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms