Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB16Q9NRJ7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB16Q9NRJ7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB16Q9NRJ7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB16Q9NRJ7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHB16Q9NRJ7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDHB16Q9NRJ7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB16Q9NRJ7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB16Q9NRJ7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHB16Q9NRJ7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHB16Q9NRJ7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 AC020907.5-201ENST00000624372 1936 ntBASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB16Q9NRJ7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms