Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP11P51784 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP11P51784 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.07■■□□□ 1.28
USP11P51784 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
USP11P51784 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.07■■□□□ 1.28
USP11P51784 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.07■■□□□ 1.28
USP11P51784 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP11P51784 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.06■■□□□ 1.28
USP11P51784 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.06■■□□□ 1.28
USP11P51784 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.06■■□□□ 1.28
USP11P51784 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
USP11P51784 AC083880.1-201ENST00000608266 535 ntBASIC23.06■■□□□ 1.28
USP11P51784 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.06■■□□□ 1.28
USP11P51784 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP11P51784 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP11P51784 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP11P51784 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
USP11P51784 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP11P51784 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP11P51784 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP11P51784 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.05■■□□□ 1.28
USP11P51784 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.05■■□□□ 1.28
USP11P51784 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.05■■□□□ 1.28
USP11P51784 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.05■■□□□ 1.28
USP11P51784 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP11P51784 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.05■■□□□ 1.28
USP11P51784 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP11P51784 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.05■■□□□ 1.28
USP11P51784 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.05■■□□□ 1.28
USP11P51784 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.05■■□□□ 1.28
USP11P51784 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
USP11P51784 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.04■■□□□ 1.28
USP11P51784 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.04■■□□□ 1.28
USP11P51784 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.04■■□□□ 1.28
USP11P51784 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
USP11P51784 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.04■■□□□ 1.28
USP11P51784 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP11P51784 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.03■■□□□ 1.28
USP11P51784 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.03■■□□□ 1.28
USP11P51784 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.03■■□□□ 1.28
USP11P51784 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
USP11P51784 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP11P51784 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.02■■□□□ 1.28
USP11P51784 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.02■■□□□ 1.28
USP11P51784 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.02■■□□□ 1.28
USP11P51784 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
USP11P51784 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
USP11P51784 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.02■■□□□ 1.28
USP11P51784 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
USP11P51784 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.02■■□□□ 1.28
USP11P51784 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.02■■□□□ 1.28
USP11P51784 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
USP11P51784 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP11P51784 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.02■■□□□ 1.28
USP11P51784 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
USP11P51784 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
USP11P51784 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP11P51784 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
USP11P51784 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP11P51784 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP11P51784 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.01■■□□□ 1.27
USP11P51784 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP11P51784 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP11P51784 KRT18P6-201ENST00000555540 1265 ntBASIC23.01■■□□□ 1.27
USP11P51784 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP11P51784 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.01■■□□□ 1.27
USP11P51784 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP11P51784 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms