Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.91□□□□□ -0.18
NDUFA1O15239 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NDUFA1O15239 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.91□□□□□ -0.18
NDUFA1O15239 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NDUFA1O15239 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
NDUFA1O15239 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 UNC93B3-201ENST00000308076 687 ntBASIC13.9□□□□□ -0.18
NDUFA1O15239 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.9□□□□□ -0.18
NDUFA1O15239 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NDUFA1O15239 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.9□□□□□ -0.18
NDUFA1O15239 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.9□□□□□ -0.18
NDUFA1O15239 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
NDUFA1O15239 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NDUFA1O15239 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
NDUFA1O15239 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NDUFA1O15239 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA1O15239 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA1O15239 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA1O15239 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA1O15239 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA1O15239 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA1O15239 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NDUFA1O15239 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA1O15239 SMUG1P1-201ENST00000590640 811 ntBASIC13.89□□□□□ -0.19
NDUFA1O15239 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA1O15239 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA1O15239 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 AC009237.3-201ENST00000393279 1427 ntBASIC13.89□□□□□ -0.19
NDUFA1O15239 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA1O15239 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA1O15239 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA1O15239 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NDUFA1O15239 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA1O15239 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA1O15239 IGHV3-19-201ENST00000521488 291 ntBASIC13.88□□□□□ -0.19
NDUFA1O15239 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA1O15239 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.88□□□□□ -0.19
NDUFA1O15239 AL136162.1-201ENST00000607711 1078 ntBASIC13.88□□□□□ -0.19
NDUFA1O15239 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA1O15239 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA1O15239 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NDUFA1O15239 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA1O15239 AC135279.3-201ENST00000610945 1311 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms