Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 AC239859.2-201ENST00000444165 318 ntBASIC14.86□□□□□ -0.03
SMKR1H3BMG3 MIR6724-1-201ENST00000616420 92 ntBASIC14.86□□□□□ -0.03
SMKR1H3BMG3 MIR6724-2-201ENST00000616483 92 ntBASIC14.86□□□□□ -0.03
SMKR1H3BMG3 MIR6724-4-201ENST00000617390 92 ntBASIC14.86□□□□□ -0.03
SMKR1H3BMG3 MIR6724-3-201ENST00000622482 92 ntBASIC14.86□□□□□ -0.03
SMKR1H3BMG3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 BX005040.4-201ENST00000637145 1518 ntBASIC14.86□□□□□ -0.03
SMKR1H3BMG3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.86□□□□□ -0.03
SMKR1H3BMG3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.85□□□□□ -0.03
SMKR1H3BMG3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMKR1H3BMG3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMKR1H3BMG3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms