Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.443e-8■■□□□ 13.9
PRPF8Q6P2Q9 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC8.51□□□□□ -1.053e-8■■□□□ 13.9
PRPF8Q6P2Q9 FBXW2-201ENST00000453291 1079 ntTSL 517.5■□□□□ 0.391e-6■■□□□ 13.9
PRPF8Q6P2Q9 FBXW2-202ENST00000474117 1062 ntTSL 514.09□□□□□ -0.151e-6■■□□□ 13.9
PRPF8Q6P2Q9 EPS8L2-202ENST00000524474 907 ntTSL 215.83■□□□□ 0.128e-15■■□□□ 13.9
PRPF8Q6P2Q9 AKAP8L-213ENST00000597994 470 ntTSL 49.67□□□□□ -0.864e-10■■□□□ 13.9
PRPF8Q6P2Q9 DNAJC11-205ENST00000460594 581 ntTSL 310.52□□□□□ -0.738e-7■■□□□ 13.9
PRPF8Q6P2Q9 UNC13D-212ENST00000589670 668 ntTSL 315.33■□□□□ 0.041e-6■■□□□ 13.9
PRPF8Q6P2Q9 UNC13D-206ENST00000586519 403 ntTSL 514.01□□□□□ -0.171e-6■■□□□ 13.9
PRPF8Q6P2Q9 FUK-206ENST00000571487 1629 ntTSL 512.46□□□□□ -0.415e-7■■□□□ 13.9
PRPF8Q6P2Q9 CUL7-202ENST00000478630 749 ntTSL 511.6□□□□□ -0.552e-8■■□□□ 13.9
PRPF8Q6P2Q9 PKD1-205ENST00000469241 659 ntTSL 217.82■□□□□ 0.444e-13■■□□□ 13.9
PRPF8Q6P2Q9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.84□□□□□ -0.032e-8■■□□□ 13.9
PRPF8Q6P2Q9 CWC15-203ENST00000542165 921 ntTSL 1 (best)17.55■□□□□ 0.48e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.02■□□□□ 0.158e-9■■□□□ 13.9
PRPF8Q6P2Q9 TBC1D31-208ENST00000519418 569 ntTSL 315.93■□□□□ 0.143e-7■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.27■□□□□ 0.048e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-203ENST00000460522 1703 ntTSL 214.8□□□□□ -0.048e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-208ENST00000477938 1715 ntTSL 214.5□□□□□ -0.098e-9■■□□□ 13.9
PRPF8Q6P2Q9 TBC1D31-203ENST00000518099 1159 ntTSL 1 (best)14.1□□□□□ -0.153e-7■■□□□ 13.9
PRPF8Q6P2Q9 CWC15-204ENST00000542907 790 ntTSL 313.87□□□□□ -0.198e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.67□□□□□ -0.228e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.298e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-212ENST00000496776 656 ntTSL 313□□□□□ -0.338e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-211ENST00000483635 2169 ntTSL 311.74□□□□□ -0.538e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.548e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC10.89□□□□□ -0.678e-9■■□□□ 13.9
PRPF8Q6P2Q9 PRSS21-206ENST00000574265 860 ntTSL 310.89□□□□□ -0.673e-6■■□□□ 13.9
PRPF8Q6P2Q9 ELP2-216ENST00000541190 583 ntTSL 210.62□□□□□ -0.718e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC10.46□□□□□ -0.748e-9■■□□□ 13.9
PRPF8Q6P2Q9 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.793e-7■■□□□ 13.9
PRPF8Q6P2Q9 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC9.88□□□□□ -0.838e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-208ENST00000611163 1919 ntTSL 2 BASIC9.45□□□□□ -0.98e-9■■□□□ 13.9
PRPF8Q6P2Q9 ELP2-207ENST00000535488 692 ntTSL 29.22□□□□□ -0.938e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-210ENST00000614977 1559 ntTSL 28.99□□□□□ -0.978e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-216ENST00000618449 2459 ntTSL 1 (best) BASIC8.9□□□□□ -0.998e-9■■□□□ 13.9
PRPF8Q6P2Q9 CWC15-202ENST00000539856 905 ntTSL 28.57□□□□□ -1.048e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-206ENST00000570205 569 ntTSL 28.08□□□□□ -1.128e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-215ENST00000617958 2776 ntTSL 1 (best) BASIC7.84□□□□□ -1.158e-9■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC7.77□□□□□ -1.178e-9■■□□□ 13.9
PRPF8Q6P2Q9 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC7.49□□□□□ -1.213e-7■■□□□ 13.9
PRPF8Q6P2Q9 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.248e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-204ENST00000463964 1874 ntTSL 37.12□□□□□ -1.278e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-206ENST00000474379 1662 ntTSL 1 (best)6.86□□□□□ -1.318e-9■■□□□ 13.9
PRPF8Q6P2Q9 PSMA3-AS1-203ENST00000554309 597 ntTSL 34.62□□□□□ -1.678e-9■■□□□ 13.9
PRPF8Q6P2Q9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.69□□□□□ -1.983e-7■■□□□ 13.9
PRPF8Q6P2Q9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.68□□□□□ -1.983e-7■■□□□ 13.9
PRPF8Q6P2Q9 TBC1D31-215ENST00000524307 3101 ntTSL 21.75□□□□□ -2.133e-7■■□□□ 13.9
PRPF8Q6P2Q9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.75□□□□□ -2.136e-13■■□□□ 13.9
PRPF8Q6P2Q9 CDC27-218ENST00000575830 397 ntTSL 51.44□□□□□ -2.188e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-205ENST00000469590 1701 ntTSL 3-0.88□□□□□ -2.558e-9■■□□□ 13.9
PRPF8Q6P2Q9 LYPLAL1-209ENST00000478794 475 ntTSL 2-1.19□□□□□ -2.68e-9■■□□□ 13.9
PRPF8Q6P2Q9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.071e-6■■□□□ 13.9
PRPF8Q6P2Q9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.131e-6■■□□□ 13.9
PRPF8Q6P2Q9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.57□□□□□ -0.241e-6■■□□□ 13.9
PRPF8Q6P2Q9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.341e-6■■□□□ 13.9
PRPF8Q6P2Q9 MYH14-209ENST00000599920 3046 ntTSL 1 (best)12.86□□□□□ -0.351e-6■■□□□ 13.9
PRPF8Q6P2Q9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.41e-6■■□□□ 13.9
PRPF8Q6P2Q9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.431e-6■■□□□ 13.9
PRPF8Q6P2Q9 FAM50A-207ENST00000494278 294 ntTSL 29.82□□□□□ -0.842e-12■■□□□ 13.9
PRPF8Q6P2Q9 FSCN1-205ENST00000473330 2215 ntTSL 215.03■□□□□ -05e-9■■□□□ 13.9
PRPF8Q6P2Q9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.45e-9■■□□□ 13.9
PRPF8Q6P2Q9 PIDD1-207ENST00000528122 577 ntTSL 312.93□□□□□ -0.345e-10■■□□□ 13.9
PRPF8Q6P2Q9 PSMD12-208ENST00000584289 1090 ntTSL 1 (best)15.32■□□□□ 0.044e-7■■□□□ 13.9
PRPF8Q6P2Q9 WWTR1-211ENST00000485352 503 ntTSL 310.13□□□□□ -0.793e-6■■□□□ 13.9
PRPF8Q6P2Q9 CTBP1-218ENST00000515690 858 ntTSL 311.55□□□□□ -0.562e-6■■□□□ 13.9
PRPF8Q6P2Q9 AGPAT3-211ENST00000467358 3955 ntTSL 28.56□□□□□ -1.046e-8■■□□□ 13.9
PRPF8Q6P2Q9 PCYT2-216ENST00000574155 572 ntTSL 413.96□□□□□ -0.184e-12■■□□□ 13.9
PRPF8Q6P2Q9 SH2B1-215ENST00000569651 821 ntTSL 516.37■□□□□ 0.212e-12■■□□□ 13.9
PRPF8Q6P2Q9 WFS1-203ENST00000506362 755 ntAPPRIS ALT2 TSL 311.56□□□□□ -0.567e-7■■□□□ 13.9
PRPF8Q6P2Q9 WFS1-205ENST00000507765 3655 ntTSL 28.48□□□□□ -1.057e-7■■□□□ 13.9
PRPF8Q6P2Q9 HIPK1-202ENST00000361587 5766 ntTSL 1 (best)7.78□□□□□ -1.162e-6■■□□□ 13.9
PRPF8Q6P2Q9 KCNH2-206ENST00000532957 3374 ntTSL 214.99□□□□□ -0.019e-7■■□□□ 13.9
PRPF8Q6P2Q9 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)14.53□□□□□ -0.089e-7■■□□□ 13.9
PRPF8Q6P2Q9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.18□□□□□ -0.149e-7■■□□□ 13.9
PRPF8Q6P2Q9 KCNH2-205ENST00000473610 2782 ntTSL 213.48□□□□□ -0.259e-7■■□□□ 13.9
PRPF8Q6P2Q9 PGS1-210ENST00000588281 1776 ntTSL 1 (best)14.15□□□□□ -0.146e-7■■□□□ 13.9
PRPF8Q6P2Q9 COX5B-204ENST00000494306 738 ntTSL 210.74□□□□□ -0.698e-7■■□□□ 13.9
PRPF8Q6P2Q9 CDK10-219ENST00000567932 725 ntTSL 315.45■□□□□ 0.064e-9■■□□□ 13.9
PRPF8Q6P2Q9 ACADVL-206ENST00000577191 1212 ntTSL 216.73■□□□□ 0.274e-7■■□□□ 13.9
PRPF8Q6P2Q9 SNHG7-202ENST00000416970 789 ntTSL 1 (best)19.65■□□□□ 0.745e-8■■□□□ 13.9
PRPF8Q6P2Q9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.07■□□□□ 0.325e-8■■□□□ 13.9
PRPF8Q6P2Q9 RPS8-207ENST00000485390 1115 ntTSL 1 (best)18.42■□□□□ 0.542e-12■■□□□ 13.9
PRPF8Q6P2Q9 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.822e-12■■□□□ 13.9
PRPF8Q6P2Q9 RPS8-201ENST00000372209 685 ntTSL 2 BASIC9.17□□□□□ -0.942e-12■■□□□ 13.9
PRPF8Q6P2Q9 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.655e-7■■□□□ 13.9
PRPF8Q6P2Q9 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.975e-7■■□□□ 13.9
PRPF8Q6P2Q9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.151e-7■■□□□ 13.9
PRPF8Q6P2Q9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.271e-7■■□□□ 13.9
PRPF8Q6P2Q9 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.681e-7■■□□□ 13.9
PRPF8Q6P2Q9 ANK1-209ENST00000520299 3587 ntTSL 27.87□□□□□ -1.152e-6■■□□□ 13.9
PRPF8Q6P2Q9 VWA1-202ENST00000471398 458 ntTSL 315.39■□□□□ 0.051e-14■■□□□ 13.9
PRPF8Q6P2Q9 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC6.98□□□□□ -1.292e-8■■□□□ 13.9
PRPF8Q6P2Q9 AGAP3-212ENST00000473633 3751 ntTSL 1 (best)7.97□□□□□ -1.134e-7■■□□□ 13.9
PRPF8Q6P2Q9 EXOC2-203ENST00000475028 536 ntTSL 412.15□□□□□ -0.468e-11■■□□□ 13.9
PRPF8Q6P2Q9 CPSF1-211ENST00000533492 510 ntTSL 513.24□□□□□ -0.293e-8■■□□□ 13.9
PRPF8Q6P2Q9 CKB-211ENST00000555039 270 ntTSL 511.94□□□□□ -0.52e-7■■□□□ 13.9
PRPF8Q6P2Q9 TSC2-223ENST00000568566 542 ntTSL 37.4□□□□□ -1.231e-7■■□□□ 13.9
PRPF8Q6P2Q9 ZC3H7A-213ENST00000575170 831 ntTSL 312.95□□□□□ -0.344e-9■■□□□ 13.9
PRPF8Q6P2Q9 MLLT10-212ENST00000476557 490 ntTSL 1 (best)5.44□□□□□ -1.541e-7■■□□□ 13.9
Retrieved 100 of 73,762 protein–RNA pairs in 1865 ms