RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
CPEB1-215ENST00000617958 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
CPEB1-215ENST00000617958 PELP1Q8IZL8 1130 aaKnown RBP18.23■□□□□ 0.51
CPEB1-215ENST00000617958 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
CPEB1-215ENST00000617958 HRCP23327 699 aa18.21■□□□□ 0.51
CPEB1-215ENST00000617958 ABCC9O60706 1549 aa18.09■□□□□ 0.49
CPEB1-215ENST00000617958 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
CPEB1-215ENST00000617958 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
CPEB1-215ENST00000617958 MYT1Q01538 1121 aa17.72■□□□□ 0.43
CPEB1-215ENST00000617958 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
CPEB1-215ENST00000617958 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
CPEB1-215ENST00000617958 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
CPEB1-215ENST00000617958 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
CPEB1-215ENST00000617958 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
CPEB1-215ENST00000617958 NACADO15069 1562 aa17.28■□□□□ 0.36
CPEB1-215ENST00000617958 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
CPEB1-215ENST00000617958 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
CPEB1-215ENST00000617958 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
CPEB1-215ENST00000617958 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
CPEB1-215ENST00000617958 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPEB1-215ENST00000617958 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
CPEB1-215ENST00000617958 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
CPEB1-215ENST00000617958 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
CPEB1-215ENST00000617958 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
CPEB1-215ENST00000617958 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
CPEB1-215ENST00000617958 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
CPEB1-215ENST00000617958 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
CPEB1-215ENST00000617958 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
CPEB1-215ENST00000617958 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
CPEB1-215ENST00000617958 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
CPEB1-215ENST00000617958 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
CPEB1-215ENST00000617958 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
CPEB1-215ENST00000617958 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
CPEB1-215ENST00000617958 WIZO95785 1651 aa16.54■□□□□ 0.24
CPEB1-215ENST00000617958 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CPEB1-215ENST00000617958 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
CPEB1-215ENST00000617958 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
CPEB1-215ENST00000617958 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
CPEB1-215ENST00000617958 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
CPEB1-215ENST00000617958 ATAD2BQ9ULI0 1458 aa16.28■□□□□ 0.2
CPEB1-215ENST00000617958 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
CPEB1-215ENST00000617958 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
CPEB1-215ENST00000617958 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
CPEB1-215ENST00000617958 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
CPEB1-215ENST00000617958 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
CPEB1-215ENST00000617958 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
CPEB1-215ENST00000617958 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
CPEB1-215ENST00000617958 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
CPEB1-215ENST00000617958 PEG3Q9GZU2 1588 aa16.1■□□□□ 0.17
CPEB1-215ENST00000617958 SMARCA2P51531 1590 aa16.1■□□□□ 0.17
CPEB1-215ENST00000617958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
CPEB1-215ENST00000617958 ANP32EQ9BTT0 268 aa16.07■□□□□ 0.16
CPEB1-215ENST00000617958 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
CPEB1-215ENST00000617958 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
CPEB1-215ENST00000617958 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
CPEB1-215ENST00000617958 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
CPEB1-215ENST00000617958 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
CPEB1-215ENST00000617958 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
CPEB1-215ENST00000617958 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
CPEB1-215ENST00000617958 NESP48681 1621 aa15.87■□□□□ 0.13
CPEB1-215ENST00000617958 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
CPEB1-215ENST00000617958 MIER1Q8N108 512 aa15.84■□□□□ 0.13
CPEB1-215ENST00000617958 TSHZ2Q9NRE2 1034 aa15.82■□□□□ 0.12
CPEB1-215ENST00000617958 SUPT16HQ9Y5B9 1047 aaKnown RBP15.82■□□□□ 0.12
CPEB1-215ENST00000617958 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
CPEB1-215ENST00000617958 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
CPEB1-215ENST00000617958 CFTRP13569 1480 aa15.71■□□□□ 0.11
CPEB1-215ENST00000617958 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
CPEB1-215ENST00000617958 SYNJ1O43426 1573 aa15.65■□□□□ 0.1
CPEB1-215ENST00000617958 RUSC2Q8N2Y8 1516 aa15.62■□□□□ 0.09
CPEB1-215ENST00000617958 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
CPEB1-215ENST00000617958 SOGA1O94964 1423 aa15.61■□□□□ 0.09
CPEB1-215ENST00000617958 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
CPEB1-215ENST00000617958 CUX1P39880 1505 aa15.56■□□□□ 0.08
CPEB1-215ENST00000617958 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
CPEB1-215ENST00000617958 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.08
CPEB1-215ENST00000617958 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
CPEB1-215ENST00000617958 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
CPEB1-215ENST00000617958 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
CPEB1-215ENST00000617958 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
CPEB1-215ENST00000617958 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
CPEB1-215ENST00000617958 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
CPEB1-215ENST00000617958 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
CPEB1-215ENST00000617958 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
CPEB1-215ENST00000617958 EEA1Q15075 1411 aa15.42■□□□□ 0.06
CPEB1-215ENST00000617958 RBM19Q9Y4C8 960 aaKnown RBP15.42■□□□□ 0.06
CPEB1-215ENST00000617958 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
CPEB1-215ENST00000617958 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
CPEB1-215ENST00000617958 RANGAP1P46060 587 aaPredicted RBP15.39■□□□□ 0.05
CPEB1-215ENST00000617958 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
CPEB1-215ENST00000617958 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
CPEB1-215ENST00000617958 APLP2Q06481 763 aa15.37■□□□□ 0.05
CPEB1-215ENST00000617958 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
CPEB1-215ENST00000617958 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
CPEB1-215ENST00000617958 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
CPEB1-215ENST00000617958 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
CPEB1-215ENST00000617958 CUX2O14529 1486 aa15.32■□□□□ 0.04
CPEB1-215ENST00000617958 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
CPEB1-215ENST00000617958 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
CPEB1-215ENST00000617958 GOLGA3Q08378 1498 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms