RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
CDC27-218ENST00000575830 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
CDC27-218ENST00000575830 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.2
CDC27-218ENST00000575830 SENP3Q9H4L4 574 aaPredicted RBP16.07■□□□□ 0.16
CDC27-218ENST00000575830 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
CDC27-218ENST00000575830 FOXD1Q16676 465 aa14.94□□□□□ -0.02
CDC27-218ENST00000575830 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
CDC27-218ENST00000575830 ADRA2BP18089 450 aa14.31□□□□□ -0.12
CDC27-218ENST00000575830 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
CDC27-218ENST00000575830 MSH5O43196 834 aa13.74□□□□□ -0.21
CDC27-218ENST00000575830 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
CDC27-218ENST00000575830 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
CDC27-218ENST00000575830 SCAF1Q9H7N4 1312 aaKnown RBP13.07□□□□□ -0.32
CDC27-218ENST00000575830 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
CDC27-218ENST00000575830 KCNA4P22459 653 aa12.88□□□□□ -0.35
CDC27-218ENST00000575830 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
CDC27-218ENST00000575830 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
CDC27-218ENST00000575830 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
CDC27-218ENST00000575830 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
CDC27-218ENST00000575830 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
CDC27-218ENST00000575830 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
CDC27-218ENST00000575830 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
CDC27-218ENST00000575830 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
CDC27-218ENST00000575830 DCAF8L1A6NGE4 600 aa12.07□□□□□ -0.48
CDC27-218ENST00000575830 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CDC27-218ENST00000575830 ZBTB22O15209 634 aa11.91□□□□□ -0.5
CDC27-218ENST00000575830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.517e-8■□□□□ 8.3
CDC27-218ENST00000575830 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
CDC27-218ENST00000575830 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
CDC27-218ENST00000575830 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
CDC27-218ENST00000575830 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
CDC27-218ENST00000575830 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
CDC27-218ENST00000575830 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
CDC27-218ENST00000575830 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
CDC27-218ENST00000575830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.59□□□□□ -0.55
CDC27-218ENST00000575830 HNRNPUL2Q1KMD3 747 aaKnown RBP11.59□□□□□ -0.55
CDC27-218ENST00000575830 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
CDC27-218ENST00000575830 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
CDC27-218ENST00000575830 APLP2Q06481 763 aa11.44□□□□□ -0.58
CDC27-218ENST00000575830 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
CDC27-218ENST00000575830 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
CDC27-218ENST00000575830 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
CDC27-218ENST00000575830 ZNF219Q9P2Y4 722 aaPredicted RBP11.3□□□□□ -0.6
CDC27-218ENST00000575830 CAPN15O75808 1086 aa11.28□□□□□ -0.6
CDC27-218ENST00000575830 DSG3P32926 999 aa11.24□□□□□ -0.61
CDC27-218ENST00000575830 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
CDC27-218ENST00000575830 POLA2Q14181 598 aa11.11□□□□□ -0.63
CDC27-218ENST00000575830 ABCB7O75027 752 aa11.06□□□□□ -0.64
CDC27-218ENST00000575830 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
CDC27-218ENST00000575830 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
CDC27-218ENST00000575830 FBLN2P98095 1184 aa10.84□□□□□ -0.67
CDC27-218ENST00000575830 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
CDC27-218ENST00000575830 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
CDC27-218ENST00000575830 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
CDC27-218ENST00000575830 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
CDC27-218ENST00000575830 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
CDC27-218ENST00000575830 SSUH2Q9Y2M2 353 aa10.64□□□□□ -0.71
CDC27-218ENST00000575830 SPDYE4A6NLX3 237 aa10.61□□□□□ -0.71
CDC27-218ENST00000575830 PROM2Q8N271 834 aa10.61□□□□□ -0.71
CDC27-218ENST00000575830 FKBP8Q14318 412 aa10.57□□□□□ -0.72
CDC27-218ENST00000575830 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
CDC27-218ENST00000575830 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
CDC27-218ENST00000575830 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
CDC27-218ENST00000575830 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDC27-218ENST00000575830 POTEHQ6S545 545 aa10.42□□□□□ -0.74
CDC27-218ENST00000575830 SPDYE1Q8NFV5 336 aaPredicted RBP10.32□□□□□ -0.76
CDC27-218ENST00000575830 PITPNM1O00562 1244 aa10.31□□□□□ -0.76
CDC27-218ENST00000575830 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
CDC27-218ENST00000575830 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
CDC27-218ENST00000575830 CHRDL2Q6WN34 429 aa10.21□□□□□ -0.77
CDC27-218ENST00000575830 FXR2P51116 673 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDC27-218ENST00000575830 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
CDC27-218ENST00000575830 PRR29P0C7W0 189 aa10.15□□□□□ -0.78
CDC27-218ENST00000575830 VASPP50552 380 aaPredicted RBP10.11□□□□□ -0.79
CDC27-218ENST00000575830 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
CDC27-218ENST00000575830 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
CDC27-218ENST00000575830 MNX1P50219 401 aaPredicted RBP10.07□□□□□ -0.8
CDC27-218ENST00000575830 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
CDC27-218ENST00000575830 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
CDC27-218ENST00000575830 MIER1Q8N108 512 aa10□□□□□ -0.81
CDC27-218ENST00000575830 CHADLQ6NUI6 762 aa9.98□□□□□ -0.81
CDC27-218ENST00000575830 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
CDC27-218ENST00000575830 FARP1Q9Y4F1 1045 aaPredicted RBP9.95□□□□□ -0.82
CDC27-218ENST00000575830 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
CDC27-218ENST00000575830 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
CDC27-218ENST00000575830 NUBP1P53384 320 aa9.89□□□□□ -0.83
CDC27-218ENST00000575830 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDC27-218ENST00000575830 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
CDC27-218ENST00000575830 C19orf67A6NJJ6 358 aa9.83□□□□□ -0.84
CDC27-218ENST00000575830 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
CDC27-218ENST00000575830 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
CDC27-218ENST00000575830 EVX2Q03828 476 aa9.72□□□□□ -0.85
CDC27-218ENST00000575830 CD44P16070 742 aaKnown RBP9.71□□□□□ -0.86
CDC27-218ENST00000575830 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.86
CDC27-218ENST00000575830 GSE1Q14687 1217 aa9.7□□□□□ -0.86
CDC27-218ENST00000575830 PKD2Q13563 968 aa9.69□□□□□ -0.86
CDC27-218ENST00000575830 FAM212AQ96EL1 285 aa9.69□□□□□ -0.86
CDC27-218ENST00000575830 HAX1O00165 279 aa9.68□□□□□ -0.86
CDC27-218ENST00000575830 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
CDC27-218ENST00000575830 ZNF579Q8NAF0 562 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 1051.2 ms