RNA–Protein interactions for RNA: ENST00000570205.1

CPEB1-206, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2

Gene CPEB1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-206ENST00000570205 NISCHQ9Y2I1 1504 aa23.07■■□□□ 1.28
CPEB1-206ENST00000570205 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
CPEB1-206ENST00000570205 ABCC9O60706 1549 aa19.86■□□□□ 0.77
CPEB1-206ENST00000570205 NACADO15069 1562 aa19.3■□□□□ 0.68
CPEB1-206ENST00000570205 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.68
CPEB1-206ENST00000570205 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
CPEB1-206ENST00000570205 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
CPEB1-206ENST00000570205 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
CPEB1-206ENST00000570205 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
CPEB1-206ENST00000570205 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
CPEB1-206ENST00000570205 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
CPEB1-206ENST00000570205 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
CPEB1-206ENST00000570205 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.56
CPEB1-206ENST00000570205 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
CPEB1-206ENST00000570205 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
CPEB1-206ENST00000570205 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
CPEB1-206ENST00000570205 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
CPEB1-206ENST00000570205 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
CPEB1-206ENST00000570205 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
CPEB1-206ENST00000570205 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
CPEB1-206ENST00000570205 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
CPEB1-206ENST00000570205 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
CPEB1-206ENST00000570205 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
CPEB1-206ENST00000570205 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
CPEB1-206ENST00000570205 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
CPEB1-206ENST00000570205 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
CPEB1-206ENST00000570205 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
CPEB1-206ENST00000570205 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
CPEB1-206ENST00000570205 WIZO95785 1651 aa17.51■□□□□ 0.39
CPEB1-206ENST00000570205 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
CPEB1-206ENST00000570205 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
CPEB1-206ENST00000570205 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
CPEB1-206ENST00000570205 PDS5BQ9NTI5 1447 aa17.2■□□□□ 0.34
CPEB1-206ENST00000570205 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
CPEB1-206ENST00000570205 NESP48681 1621 aa17.18■□□□□ 0.34
CPEB1-206ENST00000570205 CCDC88BA6NC98 1476 aa17.16■□□□□ 0.34
CPEB1-206ENST00000570205 CFTRP13569 1480 aa17.16■□□□□ 0.34
CPEB1-206ENST00000570205 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
CPEB1-206ENST00000570205 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
CPEB1-206ENST00000570205 CUX2O14529 1486 aa17.04■□□□□ 0.32
CPEB1-206ENST00000570205 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.32
CPEB1-206ENST00000570205 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
CPEB1-206ENST00000570205 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.32
CPEB1-206ENST00000570205 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
CPEB1-206ENST00000570205 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
CPEB1-206ENST00000570205 WDR62O43379 1518 aa16.92■□□□□ 0.3
CPEB1-206ENST00000570205 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
CPEB1-206ENST00000570205 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
CPEB1-206ENST00000570205 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
CPEB1-206ENST00000570205 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
CPEB1-206ENST00000570205 IFT140Q96RY7 1462 aa16.68■□□□□ 0.26
CPEB1-206ENST00000570205 CUX1P39880 1505 aa16.62■□□□□ 0.25
CPEB1-206ENST00000570205 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
CPEB1-206ENST00000570205 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
CPEB1-206ENST00000570205 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
CPEB1-206ENST00000570205 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
CPEB1-206ENST00000570205 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
CPEB1-206ENST00000570205 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
CPEB1-206ENST00000570205 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
CPEB1-206ENST00000570205 SOGA1O94964 1423 aa16.55■□□□□ 0.24
CPEB1-206ENST00000570205 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
CPEB1-206ENST00000570205 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
CPEB1-206ENST00000570205 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
CPEB1-206ENST00000570205 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
CPEB1-206ENST00000570205 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
CPEB1-206ENST00000570205 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.228e-7■□□□□ 10.5
CPEB1-206ENST00000570205 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
CPEB1-206ENST00000570205 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
CPEB1-206ENST00000570205 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
CPEB1-206ENST00000570205 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
CPEB1-206ENST00000570205 MAGI1Q96QZ7 1491 aaPredicted RBP16.36■□□□□ 0.21
CPEB1-206ENST00000570205 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
CPEB1-206ENST00000570205 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
CPEB1-206ENST00000570205 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
CPEB1-206ENST00000570205 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
CPEB1-206ENST00000570205 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
CPEB1-206ENST00000570205 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
CPEB1-206ENST00000570205 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
CPEB1-206ENST00000570205 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
CPEB1-206ENST00000570205 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
CPEB1-206ENST00000570205 CHD1O14646 1710 aa16.22■□□□□ 0.19
CPEB1-206ENST00000570205 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
CPEB1-206ENST00000570205 ADAMTS12P58397 1594 aa16.21■□□□□ 0.19
CPEB1-206ENST00000570205 FBLN2P98095 1184 aa16.19■□□□□ 0.18
CPEB1-206ENST00000570205 CUL7Q14999 1698 aa16.18■□□□□ 0.18
CPEB1-206ENST00000570205 GRIN2AQ12879 1464 aa16.16■□□□□ 0.18
CPEB1-206ENST00000570205 IGF1RP08069 1367 aa16.13■□□□□ 0.17
CPEB1-206ENST00000570205 EEA1Q15075 1411 aa16.1■□□□□ 0.17
CPEB1-206ENST00000570205 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
CPEB1-206ENST00000570205 NUP160Q12769 1436 aa16.09■□□□□ 0.17
CPEB1-206ENST00000570205 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
CPEB1-206ENST00000570205 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
CPEB1-206ENST00000570205 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
CPEB1-206ENST00000570205 RAPGEF2Q9Y4G8 1499 aa16.01■□□□□ 0.15
CPEB1-206ENST00000570205 ARHGEF11O15085 1522 aa16■□□□□ 0.15
CPEB1-206ENST00000570205 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
CPEB1-206ENST00000570205 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
CPEB1-206ENST00000570205 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
CPEB1-206ENST00000570205 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
CPEB1-206ENST00000570205 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms