RNA–Protein interactions for RNA: ENST00000614977.4

CPEB1-210, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2

Gene CPEB1, Length 1,559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-210ENST00000614977 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.73
CPEB1-210ENST00000614977 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.26
CPEB1-210ENST00000614977 ABCC9O60706 1549 aa22.22■■□□□ 1.15
CPEB1-210ENST00000614977 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
CPEB1-210ENST00000614977 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
CPEB1-210ENST00000614977 NACADO15069 1562 aa21.39■■□□□ 1.01
CPEB1-210ENST00000614977 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
CPEB1-210ENST00000614977 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
CPEB1-210ENST00000614977 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
CPEB1-210ENST00000614977 UNC13AQ9UPW8 1703 aa21■□□□□ 0.95
CPEB1-210ENST00000614977 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
CPEB1-210ENST00000614977 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.92
CPEB1-210ENST00000614977 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
CPEB1-210ENST00000614977 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
CPEB1-210ENST00000614977 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
CPEB1-210ENST00000614977 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
CPEB1-210ENST00000614977 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
CPEB1-210ENST00000614977 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
CPEB1-210ENST00000614977 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
CPEB1-210ENST00000614977 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
CPEB1-210ENST00000614977 MROH2BQ7Z745 1585 aa19.92■□□□□ 0.78
CPEB1-210ENST00000614977 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
CPEB1-210ENST00000614977 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
CPEB1-210ENST00000614977 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
CPEB1-210ENST00000614977 WIZO95785 1651 aa19.77■□□□□ 0.76
CPEB1-210ENST00000614977 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.75
CPEB1-210ENST00000614977 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
CPEB1-210ENST00000614977 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
CPEB1-210ENST00000614977 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
CPEB1-210ENST00000614977 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
CPEB1-210ENST00000614977 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
CPEB1-210ENST00000614977 DNAJC5Q9H3Z4 198 aa19.42■□□□□ 0.7
CPEB1-210ENST00000614977 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
CPEB1-210ENST00000614977 NESP48681 1621 aa19.19■□□□□ 0.66
CPEB1-210ENST00000614977 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
CPEB1-210ENST00000614977 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
CPEB1-210ENST00000614977 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
CPEB1-210ENST00000614977 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
CPEB1-210ENST00000614977 CFTRP13569 1480 aa19.1■□□□□ 0.65
CPEB1-210ENST00000614977 CUX2O14529 1486 aa19.08■□□□□ 0.64
CPEB1-210ENST00000614977 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
CPEB1-210ENST00000614977 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
CPEB1-210ENST00000614977 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
CPEB1-210ENST00000614977 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
CPEB1-210ENST00000614977 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
CPEB1-210ENST00000614977 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
CPEB1-210ENST00000614977 WDR62O43379 1518 aa18.77■□□□□ 0.6
CPEB1-210ENST00000614977 URB2Q14146 1524 aaKnown RBP18.75■□□□□ 0.59
CPEB1-210ENST00000614977 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
CPEB1-210ENST00000614977 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
CPEB1-210ENST00000614977 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
CPEB1-210ENST00000614977 CUX1P39880 1505 aa18.67■□□□□ 0.58
CPEB1-210ENST00000614977 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.58
CPEB1-210ENST00000614977 SYNJ1O43426 1573 aa18.64■□□□□ 0.57
CPEB1-210ENST00000614977 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
CPEB1-210ENST00000614977 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
CPEB1-210ENST00000614977 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
CPEB1-210ENST00000614977 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
CPEB1-210ENST00000614977 TARBP1Q13395 1621 aaKnown RBP18.5■□□□□ 0.55
CPEB1-210ENST00000614977 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
CPEB1-210ENST00000614977 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
CPEB1-210ENST00000614977 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
CPEB1-210ENST00000614977 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
CPEB1-210ENST00000614977 SOGA1O94964 1423 aa18.45■□□□□ 0.54
CPEB1-210ENST00000614977 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.53
CPEB1-210ENST00000614977 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
CPEB1-210ENST00000614977 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
CPEB1-210ENST00000614977 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
CPEB1-210ENST00000614977 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.53
CPEB1-210ENST00000614977 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
CPEB1-210ENST00000614977 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.521e-6■■■■□ 20
CPEB1-210ENST00000614977 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
CPEB1-210ENST00000614977 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
CPEB1-210ENST00000614977 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
CPEB1-210ENST00000614977 KIF27Q86VH2 1401 aa18.22■□□□□ 0.51
CPEB1-210ENST00000614977 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
CPEB1-210ENST00000614977 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
CPEB1-210ENST00000614977 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
CPEB1-210ENST00000614977 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
CPEB1-210ENST00000614977 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.49
CPEB1-210ENST00000614977 CHD1O14646 1710 aa18.13■□□□□ 0.49
CPEB1-210ENST00000614977 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
CPEB1-210ENST00000614977 CUL7Q14999 1698 aa18.11■□□□□ 0.49
CPEB1-210ENST00000614977 IGF1RP08069 1367 aa18.08■□□□□ 0.49
CPEB1-210ENST00000614977 FBLN2P98095 1184 aa18.08■□□□□ 0.48
CPEB1-210ENST00000614977 EEA1Q15075 1411 aa18.06■□□□□ 0.48
CPEB1-210ENST00000614977 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
CPEB1-210ENST00000614977 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
CPEB1-210ENST00000614977 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
CPEB1-210ENST00000614977 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
CPEB1-210ENST00000614977 GRIN2AQ12879 1464 aa18■□□□□ 0.47
CPEB1-210ENST00000614977 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
CPEB1-210ENST00000614977 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
CPEB1-210ENST00000614977 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
CPEB1-210ENST00000614977 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
CPEB1-210ENST00000614977 RIMBP3Q9UFD9 1639 aa17.95■□□□□ 0.46
CPEB1-210ENST00000614977 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
CPEB1-210ENST00000614977 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
CPEB1-210ENST00000614977 CEP170Q5SW79 1584 aa17.92■□□□□ 0.46
CPEB1-210ENST00000614977 KIF21BO75037 1637 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms