Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 AC012618.2-201ENST00000428058 849 ntBASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
PCDHB7Q9Y5E2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 AC233702.5-201ENST00000584107 538 ntBASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 AC110285.5-201ENST00000611501 352 ntBASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 REXO1L12P-201ENST00000622156 912 ntBASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB7Q9Y5E2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 ECEL1P1-201ENST00000373592 1742 ntBASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 KRASP1-201ENST00000407852 552 ntBASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHB7Q9Y5E2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 AP001412.1-201ENST00000608405 714 ntBASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PCDHB7Q9Y5E2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms