Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 AC005332.7-201ENST00000614046 2005 ntBASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 AC026471.1-201ENST00000564629 3026 ntBASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 AC092720.2-201ENST00000602388 1665 ntBASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHMP6Q96FZ7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 OR2I1P-207ENST00000453522 948 ntBASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP6Q96FZ7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 AC092171.4-201ENST00000609130 632 ntBASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP6Q96FZ7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP6Q96FZ7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms