Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 OR6D1P-203ENST00000641209 4860 ntBASIC10.24□□□□□ -0.77
LINC01554Q52M75 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 COMT-203ENST00000403184 2217 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 FBXW4P1-201ENST00000426721 2239 ntBASIC10.23□□□□□ -0.77
LINC01554Q52M75 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC01554Q52M75 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC01554Q52M75 AC007613.1-201ENST00000572811 2597 ntBASIC10.22□□□□□ -0.77
LINC01554Q52M75 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 PRORSD1P-202ENST00000563365 2154 ntBASIC10.22□□□□□ -0.77
LINC01554Q52M75 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 F11R-206ENST00000621309 4770 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC01554Q52M75 AL022069.1-201ENST00000568025 1636 ntBASIC10.22□□□□□ -0.77
LINC01554Q52M75 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01554Q52M75 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LINC01554Q52M75 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01554Q52M75 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms