Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NDUFS3O75489 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 AC006015.1-201ENST00000429970 570 ntBASIC20.34■□□□□ 0.85
NDUFS3O75489 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 MIR2861-201ENST00000636310 90 ntBASIC20.34■□□□□ 0.85
NDUFS3O75489 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.34■□□□□ 0.85
NDUFS3O75489 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS3O75489 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS3O75489 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.33■□□□□ 0.85
NDUFS3O75489 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.33■□□□□ 0.85
NDUFS3O75489 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS3O75489 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.33■□□□□ 0.85
NDUFS3O75489 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS3O75489 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.33■□□□□ 0.85
NDUFS3O75489 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.33■□□□□ 0.85
NDUFS3O75489 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.33■□□□□ 0.85
NDUFS3O75489 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.33■□□□□ 0.85
NDUFS3O75489 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NDUFS3O75489 AC011767.1-201ENST00000617410 1153 ntBASIC20.33■□□□□ 0.85
NDUFS3O75489 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NDUFS3O75489 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
NDUFS3O75489 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFS3O75489 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
NDUFS3O75489 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFS3O75489 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFS3O75489 AL121603.2-201ENST00000557373 2117 ntBASIC20.33■□□□□ 0.84
NDUFS3O75489 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFS3O75489 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
NDUFS3O75489 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.33■□□□□ 0.84
NDUFS3O75489 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFS3O75489 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NDUFS3O75489 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.33■□□□□ 0.84
NDUFS3O75489 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NDUFS3O75489 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFS3O75489 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 AC020907.5-201ENST00000624372 1936 ntBASIC20.32■□□□□ 0.84
NDUFS3O75489 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFS3O75489 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.32■□□□□ 0.84
NDUFS3O75489 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.32■□□□□ 0.84
NDUFS3O75489 AC022517.1-201ENST00000592429 346 ntBASIC20.32■□□□□ 0.84
NDUFS3O75489 FAM21FP-204ENST00000608637 956 ntBASIC20.32■□□□□ 0.84
NDUFS3O75489 BID-214ENST00000617586 542 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFS3O75489 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFS3O75489 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFS3O75489 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS3O75489 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
NDUFS3O75489 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFS3O75489 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.31■□□□□ 0.84
NDUFS3O75489 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.31■□□□□ 0.84
NDUFS3O75489 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.31■□□□□ 0.84
NDUFS3O75489 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.31■□□□□ 0.84
NDUFS3O75489 AC007322.4-201ENST00000509611 723 ntBASIC20.31■□□□□ 0.84
NDUFS3O75489 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.31■□□□□ 0.84
NDUFS3O75489 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NDUFS3O75489 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS3O75489 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.3■□□□□ 0.84
NDUFS3O75489 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NDUFS3O75489 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS3O75489 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFS3O75489 DUX4L16-201ENST00000555130 1264 ntBASIC20.3■□□□□ 0.84
NDUFS3O75489 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms