Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.3■□□□□ 0.68
URB1O60287 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
URB1O60287 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.3■□□□□ 0.68
URB1O60287 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.3■□□□□ 0.68
URB1O60287 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.3■□□□□ 0.68
URB1O60287 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.3■□□□□ 0.68
URB1O60287 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.3■□□□□ 0.68
URB1O60287 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.3■□□□□ 0.68
URB1O60287 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.3■□□□□ 0.68
URB1O60287 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
URB1O60287 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
URB1O60287 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
URB1O60287 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.3■□□□□ 0.68
URB1O60287 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.3■□□□□ 0.68
URB1O60287 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.3■□□□□ 0.68
URB1O60287 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.3■□□□□ 0.68
URB1O60287 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
URB1O60287 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
URB1O60287 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
URB1O60287 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
URB1O60287 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
URB1O60287 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
URB1O60287 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
URB1O60287 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
URB1O60287 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.29■□□□□ 0.68
URB1O60287 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.29■□□□□ 0.68
URB1O60287 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.29■□□□□ 0.68
URB1O60287 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.29■□□□□ 0.68
URB1O60287 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
URB1O60287 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
URB1O60287 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
URB1O60287 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.29■□□□□ 0.68
URB1O60287 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.29■□□□□ 0.68
URB1O60287 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.29■□□□□ 0.68
URB1O60287 KRT18P22-201ENST00000402024 1347 ntBASIC19.29■□□□□ 0.68
URB1O60287 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
URB1O60287 AC005363.2-201ENST00000618631 242 ntBASIC19.28■□□□□ 0.68
URB1O60287 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
URB1O60287 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.28■□□□□ 0.68
URB1O60287 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
URB1O60287 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
URB1O60287 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.28■□□□□ 0.68
URB1O60287 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
URB1O60287 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
URB1O60287 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.28■□□□□ 0.68
URB1O60287 AC087742.1-201ENST00000575880 1738 ntBASIC19.28■□□□□ 0.68
URB1O60287 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
URB1O60287 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
URB1O60287 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
URB1O60287 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
URB1O60287 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
URB1O60287 AC073508.3-201ENST00000619697 1419 ntBASIC19.28■□□□□ 0.68
URB1O60287 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
URB1O60287 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
URB1O60287 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
URB1O60287 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.27■□□□□ 0.68
URB1O60287 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
URB1O60287 C11orf96-202ENST00000528572 1834 ntBASIC19.27■□□□□ 0.68
URB1O60287 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.27■□□□□ 0.68
URB1O60287 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
URB1O60287 AC093323.1-202ENST00000635031 2045 ntBASIC19.27■□□□□ 0.68
URB1O60287 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
URB1O60287 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.27■□□□□ 0.68
URB1O60287 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.27■□□□□ 0.67
URB1O60287 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
URB1O60287 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
URB1O60287 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
URB1O60287 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
URB1O60287 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.26■□□□□ 0.67
URB1O60287 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
URB1O60287 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.26■□□□□ 0.67
URB1O60287 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.26■□□□□ 0.67
URB1O60287 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
URB1O60287 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
URB1O60287 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
URB1O60287 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
URB1O60287 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
URB1O60287 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
URB1O60287 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.26■□□□□ 0.67
URB1O60287 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.26■□□□□ 0.67
URB1O60287 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
URB1O60287 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.25■□□□□ 0.67
URB1O60287 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
URB1O60287 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
URB1O60287 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
URB1O60287 UPK3BP1-201ENST00000428678 509 ntBASIC19.25■□□□□ 0.67
URB1O60287 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
URB1O60287 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.25■□□□□ 0.67
URB1O60287 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.25■□□□□ 0.67
URB1O60287 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.25■□□□□ 0.67
URB1O60287 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
URB1O60287 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.25■□□□□ 0.67
URB1O60287 AC005829.2-201ENST00000571422 1056 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms