Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC128688.1-201ENST00000487626 519 ntBASIC21.96■■□□□ 1.11
SOX1O00570 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.96■■□□□ 1.11
SOX1O00570 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.96■■□□□ 1.11
SOX1O00570 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.96■■□□□ 1.11
SOX1O00570 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.96■■□□□ 1.11
SOX1O00570 AC004263.2-201ENST00000617183 678 ntBASIC21.96■■□□□ 1.11
SOX1O00570 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SOX1O00570 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.96■■□□□ 1.11
SOX1O00570 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SOX1O00570 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.96■■□□□ 1.11
SOX1O00570 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SOX1O00570 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.96■■□□□ 1.11
SOX1O00570 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SOX1O00570 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.95■■□□□ 1.1
SOX1O00570 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.95■■□□□ 1.1
SOX1O00570 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.95■■□□□ 1.1
SOX1O00570 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SOX1O00570 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SOX1O00570 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.95■■□□□ 1.1
SOX1O00570 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.95■■□□□ 1.1
SOX1O00570 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.95■■□□□ 1.1
SOX1O00570 AL121906.2-201ENST00000621597 723 ntBASIC21.95■■□□□ 1.1
SOX1O00570 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.95■■□□□ 1.1
SOX1O00570 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.95■■□□□ 1.1
SOX1O00570 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 IER3-202ENST00000376377 1350 ntBASIC21.95■■□□□ 1.1
SOX1O00570 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOX1O00570 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOX1O00570 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SOX1O00570 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.94■■□□□ 1.1
SOX1O00570 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.94■■□□□ 1.1
SOX1O00570 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.94■■□□□ 1.1
SOX1O00570 AC139887.4-201ENST00000607877 719 ntBASIC21.94■■□□□ 1.1
SOX1O00570 AL121829.2-201ENST00000620908 328 ntBASIC21.94■■□□□ 1.1
SOX1O00570 CR392000.1-201ENST00000624770 1228 ntBASIC21.94■■□□□ 1.1
SOX1O00570 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SOX1O00570 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.94■■□□□ 1.1
SOX1O00570 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SOX1O00570 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SOX1O00570 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOX1O00570 AC004812.2-201ENST00000611079 2094 ntBASIC21.94■■□□□ 1.1
SOX1O00570 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SOX1O00570 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.93■■□□□ 1.1
SOX1O00570 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.93■■□□□ 1.1
SOX1O00570 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.93■■□□□ 1.1
SOX1O00570 KRT18P16-201ENST00000510337 1294 ntBASIC21.93■■□□□ 1.1
SOX1O00570 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SOX1O00570 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.93■■□□□ 1.1
SOX1O00570 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.93■■□□□ 1.1
SOX1O00570 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SOX1O00570 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.92■■□□□ 1.1
SOX1O00570 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SOX1O00570 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SOX1O00570 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.92■■□□□ 1.1
SOX1O00570 FDX1P1-201ENST00000449115 551 ntBASIC21.92■■□□□ 1.1
SOX1O00570 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.92■■□□□ 1.1
SOX1O00570 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.92■■□□□ 1.1
SOX1O00570 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.92■■□□□ 1.1
SOX1O00570 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.92■■□□□ 1.1
SOX1O00570 AC003102.1-202ENST00000563394 1796 ntBASIC21.92■■□□□ 1.1
SOX1O00570 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOX1O00570 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOX1O00570 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.91■■□□□ 1.1
SOX1O00570 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SOX1O00570 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms