Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.44□□□□□ -0.1
LINC01546A6NGU7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 AL031848.2-201ENST00000607670 837 ntBASIC14.44□□□□□ -0.1
LINC01546A6NGU7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 YBX1P4-201ENST00000392794 808 ntBASIC14.43□□□□□ -0.1
LINC01546A6NGU7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 MIR2861-201ENST00000636310 90 ntBASIC14.43□□□□□ -0.1
LINC01546A6NGU7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01546A6NGU7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.42□□□□□ -0.1
LINC01546A6NGU7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 BX119927.1-201ENST00000636596 1552 ntBASIC14.42□□□□□ -0.1
LINC01546A6NGU7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01546A6NGU7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 AC099791.2-201ENST00000605725 427 ntBASIC14.41□□□□□ -0.1
LINC01546A6NGU7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms