Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MIR3665-201ENST00000578708 105 ntBASIC31.19■■■□□ 2.58
DDX49Q9Y6V7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.19■■■□□ 2.58
DDX49Q9Y6V7 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.19■■■□□ 2.58
DDX49Q9Y6V7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
DDX49Q9Y6V7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.19■■■□□ 2.58
DDX49Q9Y6V7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
DDX49Q9Y6V7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
DDX49Q9Y6V7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
DDX49Q9Y6V7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
DDX49Q9Y6V7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
DDX49Q9Y6V7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.16■■■□□ 2.58
DDX49Q9Y6V7 WASH5P-204ENST00000632292 975 ntBASIC31.16■■■□□ 2.58
DDX49Q9Y6V7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
DDX49Q9Y6V7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DDX49Q9Y6V7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.14■■■□□ 2.58
DDX49Q9Y6V7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX49Q9Y6V7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX49Q9Y6V7 AC005559.1-201ENST00000589661 871 ntBASIC31.12■■■□□ 2.57
DDX49Q9Y6V7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DDX49Q9Y6V7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DDX49Q9Y6V7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
DDX49Q9Y6V7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.1■■■□□ 2.57
DDX49Q9Y6V7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.09■■■□□ 2.57
DDX49Q9Y6V7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.08■■■□□ 2.57
DDX49Q9Y6V7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
DDX49Q9Y6V7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.08■■■□□ 2.57
DDX49Q9Y6V7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.08■■■□□ 2.57
DDX49Q9Y6V7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
DDX49Q9Y6V7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
DDX49Q9Y6V7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
DDX49Q9Y6V7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
DDX49Q9Y6V7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.06■■■□□ 2.56
DDX49Q9Y6V7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
DDX49Q9Y6V7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
DDX49Q9Y6V7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
DDX49Q9Y6V7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
DDX49Q9Y6V7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
DDX49Q9Y6V7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
DDX49Q9Y6V7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
DDX49Q9Y6V7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.02■■■□□ 2.56
DDX49Q9Y6V7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
DDX49Q9Y6V7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
DDX49Q9Y6V7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
DDX49Q9Y6V7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
DDX49Q9Y6V7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
DDX49Q9Y6V7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
DDX49Q9Y6V7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
DDX49Q9Y6V7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
DDX49Q9Y6V7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.99■■■□□ 2.55
DDX49Q9Y6V7 ABHD17AP4-201ENST00000411545 909 ntBASIC30.99■■■□□ 2.55
DDX49Q9Y6V7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
DDX49Q9Y6V7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
DDX49Q9Y6V7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
DDX49Q9Y6V7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
DDX49Q9Y6V7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
DDX49Q9Y6V7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
DDX49Q9Y6V7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.95■■■□□ 2.55
DDX49Q9Y6V7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
DDX49Q9Y6V7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.94■■■□□ 2.54
DDX49Q9Y6V7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX49Q9Y6V7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.94■■■□□ 2.54
DDX49Q9Y6V7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
DDX49Q9Y6V7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
DDX49Q9Y6V7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
DDX49Q9Y6V7 AC044849.2-201ENST00000606596 710 ntBASIC30.92■■■□□ 2.54
DDX49Q9Y6V7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
DDX49Q9Y6V7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
DDX49Q9Y6V7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
DDX49Q9Y6V7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
DDX49Q9Y6V7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
DDX49Q9Y6V7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
DDX49Q9Y6V7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
DDX49Q9Y6V7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
DDX49Q9Y6V7 MIR7108-201ENST00000614319 87 ntBASIC30.9■■■□□ 2.54
DDX49Q9Y6V7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
DDX49Q9Y6V7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
DDX49Q9Y6V7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
DDX49Q9Y6V7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
DDX49Q9Y6V7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
DDX49Q9Y6V7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.88■■■□□ 2.53
DDX49Q9Y6V7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
DDX49Q9Y6V7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.87■■■□□ 2.53
DDX49Q9Y6V7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
DDX49Q9Y6V7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
DDX49Q9Y6V7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
DDX49Q9Y6V7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX49Q9Y6V7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.53
DDX49Q9Y6V7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
DDX49Q9Y6V7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.86■■■□□ 2.53
DDX49Q9Y6V7 AC142086.6-201ENST00000621154 1765 ntBASIC30.86■■■□□ 2.53
DDX49Q9Y6V7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
DDX49Q9Y6V7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
DDX49Q9Y6V7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.85■■■□□ 2.53
DDX49Q9Y6V7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
DDX49Q9Y6V7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
DDX49Q9Y6V7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
DDX49Q9Y6V7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
DDX49Q9Y6V7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
DDX49Q9Y6V7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
DDX49Q9Y6V7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms