Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC010864.1-201ENST00000609407 1511 ntBASIC26.71■■□□□ 1.87
LRRC40Q9H9A6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.71■■□□□ 1.87
LRRC40Q9H9A6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
LRRC40Q9H9A6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
LRRC40Q9H9A6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.69■■□□□ 1.86
LRRC40Q9H9A6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.69■■□□□ 1.86
LRRC40Q9H9A6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.68■■□□□ 1.86
LRRC40Q9H9A6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.68■■□□□ 1.86
LRRC40Q9H9A6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
LRRC40Q9H9A6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LRRC40Q9H9A6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LRRC40Q9H9A6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LRRC40Q9H9A6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRRC40Q9H9A6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRRC40Q9H9A6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRRC40Q9H9A6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
LRRC40Q9H9A6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.64■■□□□ 1.85
LRRC40Q9H9A6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
LRRC40Q9H9A6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.63■■□□□ 1.85
LRRC40Q9H9A6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
LRRC40Q9H9A6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
LRRC40Q9H9A6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LRRC40Q9H9A6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LRRC40Q9H9A6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC40Q9H9A6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC40Q9H9A6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.61■■□□□ 1.85
LRRC40Q9H9A6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC40Q9H9A6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC40Q9H9A6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC40Q9H9A6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.6■■□□□ 1.85
LRRC40Q9H9A6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC40Q9H9A6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC40Q9H9A6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.59■■□□□ 1.85
LRRC40Q9H9A6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
LRRC40Q9H9A6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC40Q9H9A6 SUZ12P1-203ENST00000578195 985 ntBASIC26.57■■□□□ 1.84
LRRC40Q9H9A6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC40Q9H9A6 MIR762-201ENST00000390236 83 ntBASIC26.56■■□□□ 1.84
LRRC40Q9H9A6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC40Q9H9A6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC40Q9H9A6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.55■■□□□ 1.84
LRRC40Q9H9A6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC40Q9H9A6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
LRRC40Q9H9A6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRRC40Q9H9A6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
LRRC40Q9H9A6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC40Q9H9A6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LRRC40Q9H9A6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.52■■□□□ 1.84
LRRC40Q9H9A6 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.52■■□□□ 1.84
LRRC40Q9H9A6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.51■■□□□ 1.84
LRRC40Q9H9A6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LRRC40Q9H9A6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LRRC40Q9H9A6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
LRRC40Q9H9A6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.51■■□□□ 1.83
LRRC40Q9H9A6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC40Q9H9A6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC40Q9H9A6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC40Q9H9A6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.5■■□□□ 1.83
LRRC40Q9H9A6 AL139393.2-201ENST00000608721 2025 ntBASIC26.49■■□□□ 1.83
LRRC40Q9H9A6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
LRRC40Q9H9A6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRRC40Q9H9A6 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.46■■□□□ 1.83
LRRC40Q9H9A6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRRC40Q9H9A6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.46■■□□□ 1.83
LRRC40Q9H9A6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRRC40Q9H9A6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LRRC40Q9H9A6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
LRRC40Q9H9A6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
LRRC40Q9H9A6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
LRRC40Q9H9A6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.44■■□□□ 1.82
LRRC40Q9H9A6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.43■■□□□ 1.82
LRRC40Q9H9A6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRC40Q9H9A6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRC40Q9H9A6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC40Q9H9A6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.42■■□□□ 1.82
LRRC40Q9H9A6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC40Q9H9A6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.42■■□□□ 1.82
LRRC40Q9H9A6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC40Q9H9A6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC40Q9H9A6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC40Q9H9A6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LRRC40Q9H9A6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LRRC40Q9H9A6 AC005559.1-201ENST00000589661 871 ntBASIC26.41■■□□□ 1.82
LRRC40Q9H9A6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LRRC40Q9H9A6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LRRC40Q9H9A6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LRRC40Q9H9A6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
LRRC40Q9H9A6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
LRRC40Q9H9A6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LRRC40Q9H9A6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LRRC40Q9H9A6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LRRC40Q9H9A6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LRRC40Q9H9A6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.34■■□□□ 1.81
LRRC40Q9H9A6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
LRRC40Q9H9A6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LRRC40Q9H9A6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRRC40Q9H9A6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
LRRC40Q9H9A6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
LRRC40Q9H9A6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
LRRC40Q9H9A6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms