Protein–RNA interactions for Protein: Q9H2X6

HIPK2, Homeodomain-interacting protein kinase 2, humanhuman

Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2Q9H2X6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.3■■□□□ 1
HIPK2Q9H2X6 AL135925.1-201ENST00000605920 1701 ntBASIC21.29■■□□□ 1
HIPK2Q9H2X6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK2Q9H2X6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.29■■□□□ 1
HIPK2Q9H2X6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK2Q9H2X6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIPK2Q9H2X6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIPK2Q9H2X6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HIPK2Q9H2X6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK2Q9H2X6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK2Q9H2X6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK2Q9H2X6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK2Q9H2X6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK2Q9H2X6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK2Q9H2X6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HIPK2Q9H2X6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK2Q9H2X6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
HIPK2Q9H2X6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HIPK2Q9H2X6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.24■□□□□ 0.99
HIPK2Q9H2X6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.24■□□□□ 0.99
HIPK2Q9H2X6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HIPK2Q9H2X6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIPK2Q9H2X6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.23■□□□□ 0.99
HIPK2Q9H2X6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HIPK2Q9H2X6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK2Q9H2X6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK2Q9H2X6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK2Q9H2X6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK2Q9H2X6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK2Q9H2X6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK2Q9H2X6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK2Q9H2X6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK2Q9H2X6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.19■□□□□ 0.98
HIPK2Q9H2X6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK2Q9H2X6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HIPK2Q9H2X6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK2Q9H2X6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HIPK2Q9H2X6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK2Q9H2X6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK2Q9H2X6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK2Q9H2X6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIPK2Q9H2X6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.17■□□□□ 0.98
HIPK2Q9H2X6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIPK2Q9H2X6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.15■□□□□ 0.98
HIPK2Q9H2X6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.15■□□□□ 0.98
HIPK2Q9H2X6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HIPK2Q9H2X6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIPK2Q9H2X6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIPK2Q9H2X6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.14■□□□□ 0.97
HIPK2Q9H2X6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.14■□□□□ 0.97
HIPK2Q9H2X6 AL121749.1-202ENST00000609313 2153 ntBASIC21.14■□□□□ 0.97
HIPK2Q9H2X6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIPK2Q9H2X6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIPK2Q9H2X6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.12■□□□□ 0.97
HIPK2Q9H2X6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK2Q9H2X6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.11■□□□□ 0.97
HIPK2Q9H2X6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK2Q9H2X6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HIPK2Q9H2X6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HIPK2Q9H2X6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HIPK2Q9H2X6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HIPK2Q9H2X6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK2Q9H2X6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK2Q9H2X6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIPK2Q9H2X6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.1■□□□□ 0.97
HIPK2Q9H2X6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK2Q9H2X6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK2Q9H2X6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK2Q9H2X6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK2Q9H2X6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK2Q9H2X6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK2Q9H2X6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.09■□□□□ 0.97
HIPK2Q9H2X6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIPK2Q9H2X6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.08■□□□□ 0.97
HIPK2Q9H2X6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.08■□□□□ 0.97
HIPK2Q9H2X6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIPK2Q9H2X6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.08■□□□□ 0.96
HIPK2Q9H2X6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.07■□□□□ 0.96
HIPK2Q9H2X6 AC135731.1-201ENST00000569415 2548 ntBASIC21.07■□□□□ 0.96
HIPK2Q9H2X6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK2Q9H2X6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.06■□□□□ 0.96
HIPK2Q9H2X6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HIPK2Q9H2X6 WASH5P-204ENST00000632292 975 ntBASIC21.05■□□□□ 0.96
HIPK2Q9H2X6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK2Q9H2X6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK2Q9H2X6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.04■□□□□ 0.96
HIPK2Q9H2X6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK2Q9H2X6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK2Q9H2X6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK2Q9H2X6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK2Q9H2X6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
HIPK2Q9H2X6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HIPK2Q9H2X6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms