Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFAF3Q9BU61 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFAF3Q9BU61 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.98■□□□□ 0.79
NDUFAF3Q9BU61 RARRES2P7-201ENST00000567349 469 ntBASIC19.97■□□□□ 0.79
NDUFAF3Q9BU61 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFAF3Q9BU61 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFAF3Q9BU61 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFAF3Q9BU61 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NDUFAF3Q9BU61 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 AC142086.6-201ENST00000621154 1765 ntBASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NDUFAF3Q9BU61 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFAF3Q9BU61 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFAF3Q9BU61 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.94■□□□□ 0.78
NDUFAF3Q9BU61 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.94■□□□□ 0.78
NDUFAF3Q9BU61 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
NDUFAF3Q9BU61 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
NDUFAF3Q9BU61 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NDUFAF3Q9BU61 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.92■□□□□ 0.78
NDUFAF3Q9BU61 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NDUFAF3Q9BU61 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDUFAF3Q9BU61 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NDUFAF3Q9BU61 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NDUFAF3Q9BU61 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDUFAF3Q9BU61 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDUFAF3Q9BU61 AL121749.1-202ENST00000609313 2153 ntBASIC19.9■□□□□ 0.78
NDUFAF3Q9BU61 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NDUFAF3Q9BU61 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NDUFAF3Q9BU61 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDUFAF3Q9BU61 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
NDUFAF3Q9BU61 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NDUFAF3Q9BU61 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.88■□□□□ 0.77
NDUFAF3Q9BU61 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NDUFAF3Q9BU61 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NDUFAF3Q9BU61 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NDUFAF3Q9BU61 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.87■□□□□ 0.77
NDUFAF3Q9BU61 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NDUFAF3Q9BU61 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.86■□□□□ 0.77
NDUFAF3Q9BU61 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.85■□□□□ 0.77
NDUFAF3Q9BU61 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.85■□□□□ 0.77
NDUFAF3Q9BU61 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NDUFAF3Q9BU61 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NDUFAF3Q9BU61 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFAF3Q9BU61 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NDUFAF3Q9BU61 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.84■□□□□ 0.77
NDUFAF3Q9BU61 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.84■□□□□ 0.77
NDUFAF3Q9BU61 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFAF3Q9BU61 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NDUFAF3Q9BU61 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.83■□□□□ 0.77
NDUFAF3Q9BU61 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.83■□□□□ 0.77
NDUFAF3Q9BU61 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFAF3Q9BU61 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFAF3Q9BU61 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFAF3Q9BU61 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFAF3Q9BU61 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFAF3Q9BU61 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFAF3Q9BU61 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFAF3Q9BU61 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.8■□□□□ 0.76
NDUFAF3Q9BU61 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFAF3Q9BU61 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFAF3Q9BU61 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFAF3Q9BU61 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.79■□□□□ 0.76
NDUFAF3Q9BU61 AC120057.4-201ENST00000624722 1615 ntBASIC19.78■□□□□ 0.76
NDUFAF3Q9BU61 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NDUFAF3Q9BU61 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NDUFAF3Q9BU61 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.77■□□□□ 0.76
NDUFAF3Q9BU61 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDUFAF3Q9BU61 SETD8P1-201ENST00000623146 1180 ntBASIC19.77■□□□□ 0.76
NDUFAF3Q9BU61 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.77■□□□□ 0.76
NDUFAF3Q9BU61 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NDUFAF3Q9BU61 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.76■□□□□ 0.75
NDUFAF3Q9BU61 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFAF3Q9BU61 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFAF3Q9BU61 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFAF3Q9BU61 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.76■□□□□ 0.75
NDUFAF3Q9BU61 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NDUFAF3Q9BU61 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDUFAF3Q9BU61 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDUFAF3Q9BU61 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFAF3Q9BU61 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.74■□□□□ 0.75
NDUFAF3Q9BU61 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.74■□□□□ 0.75
NDUFAF3Q9BU61 AC097358.2-201ENST00000607541 1159 ntBASIC19.74■□□□□ 0.75
NDUFAF3Q9BU61 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFAF3Q9BU61 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFAF3Q9BU61 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFAF3Q9BU61 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms