Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
COMMD1Q8N668 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.54■■□□□ 1.04
COMMD1Q8N668 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.53■■□□□ 1.04
COMMD1Q8N668 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.53■■□□□ 1.04
COMMD1Q8N668 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD1Q8N668 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD1Q8N668 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COMMD1Q8N668 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.51■■□□□ 1.03
COMMD1Q8N668 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD1Q8N668 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD1Q8N668 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD1Q8N668 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.5■■□□□ 1.03
COMMD1Q8N668 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD1Q8N668 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD1Q8N668 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD1Q8N668 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD1Q8N668 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD1Q8N668 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD1Q8N668 SUZ12P1-203ENST00000578195 985 ntBASIC21.49■■□□□ 1.03
COMMD1Q8N668 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD1Q8N668 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD1Q8N668 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.48■■□□□ 1.03
COMMD1Q8N668 AL391121.1-201ENST00000607967 1349 ntBASIC21.48■■□□□ 1.03
COMMD1Q8N668 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COMMD1Q8N668 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD1Q8N668 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.46■■□□□ 1.03
COMMD1Q8N668 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD1Q8N668 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD1Q8N668 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COMMD1Q8N668 CAHM-201ENST00000604200 896 ntBASIC21.45■■□□□ 1.02
COMMD1Q8N668 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.45■■□□□ 1.02
COMMD1Q8N668 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COMMD1Q8N668 ST7-AS1-201ENST00000456775 1889 ntBASIC21.44■■□□□ 1.02
COMMD1Q8N668 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD1Q8N668 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD1Q8N668 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COMMD1Q8N668 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD1Q8N668 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD1Q8N668 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD1Q8N668 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD1Q8N668 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COMMD1Q8N668 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
COMMD1Q8N668 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COMMD1Q8N668 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COMMD1Q8N668 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD1Q8N668 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.41■■□□□ 1.02
COMMD1Q8N668 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD1Q8N668 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COMMD1Q8N668 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COMMD1Q8N668 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.4■■□□□ 1.02
COMMD1Q8N668 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.4■■□□□ 1.02
COMMD1Q8N668 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.39■■□□□ 1.01
COMMD1Q8N668 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD1Q8N668 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD1Q8N668 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
COMMD1Q8N668 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD1Q8N668 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD1Q8N668 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.38■■□□□ 1.01
COMMD1Q8N668 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
COMMD1Q8N668 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD1Q8N668 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD1Q8N668 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
COMMD1Q8N668 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD1Q8N668 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.37■■□□□ 1.01
COMMD1Q8N668 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD1Q8N668 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD1Q8N668 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COMMD1Q8N668 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD1Q8N668 AL121749.1-202ENST00000609313 2153 ntBASIC21.36■■□□□ 1.01
COMMD1Q8N668 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD1Q8N668 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD1Q8N668 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COMMD1Q8N668 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD1Q8N668 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
COMMD1Q8N668 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD1Q8N668 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD1Q8N668 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD1Q8N668 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.33■■□□□ 1
COMMD1Q8N668 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
COMMD1Q8N668 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD1Q8N668 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.32■■□□□ 1
COMMD1Q8N668 AP006261.1-201ENST00000584783 668 ntBASIC21.32■■□□□ 1
COMMD1Q8N668 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD1Q8N668 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD1Q8N668 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD1Q8N668 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD1Q8N668 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD1Q8N668 WASH5P-204ENST00000632292 975 ntBASIC21.31■■□□□ 1
COMMD1Q8N668 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD1Q8N668 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.3■■□□□ 1
COMMD1Q8N668 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD1Q8N668 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.29■■□□□ 1
COMMD1Q8N668 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD1Q8N668 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.29■■□□□ 1
COMMD1Q8N668 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.29■■□□□ 1
COMMD1Q8N668 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
COMMD1Q8N668 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COMMD1Q8N668 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
COMMD1Q8N668 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.27■□□□□ 0.99
COMMD1Q8N668 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms