Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCUBE1Q8IWY4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCUBE1Q8IWY4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SCUBE1Q8IWY4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCUBE1Q8IWY4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
SCUBE1Q8IWY4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCUBE1Q8IWY4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCUBE1Q8IWY4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE1Q8IWY4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE1Q8IWY4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE1Q8IWY4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.72■■□□□ 1.71
SCUBE1Q8IWY4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SCUBE1Q8IWY4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE1Q8IWY4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.71■■□□□ 1.71
SCUBE1Q8IWY4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCUBE1Q8IWY4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.71■■□□□ 1.71
SCUBE1Q8IWY4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.69■■□□□ 1.7
SCUBE1Q8IWY4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.69■■□□□ 1.7
SCUBE1Q8IWY4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCUBE1Q8IWY4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCUBE1Q8IWY4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCUBE1Q8IWY4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.67■■□□□ 1.7
SCUBE1Q8IWY4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCUBE1Q8IWY4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
SCUBE1Q8IWY4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCUBE1Q8IWY4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SCUBE1Q8IWY4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
SCUBE1Q8IWY4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SCUBE1Q8IWY4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SCUBE1Q8IWY4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SCUBE1Q8IWY4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCUBE1Q8IWY4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.63■■□□□ 1.69
SCUBE1Q8IWY4 CAHM-201ENST00000604200 896 ntBASIC25.63■■□□□ 1.69
SCUBE1Q8IWY4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCUBE1Q8IWY4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCUBE1Q8IWY4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.62■■□□□ 1.69
SCUBE1Q8IWY4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SCUBE1Q8IWY4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCUBE1Q8IWY4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCUBE1Q8IWY4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCUBE1Q8IWY4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCUBE1Q8IWY4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
SCUBE1Q8IWY4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SCUBE1Q8IWY4 AL391121.1-201ENST00000607967 1349 ntBASIC25.6■■□□□ 1.69
SCUBE1Q8IWY4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCUBE1Q8IWY4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.59■■□□□ 1.69
SCUBE1Q8IWY4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SCUBE1Q8IWY4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.58■■□□□ 1.69
SCUBE1Q8IWY4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SCUBE1Q8IWY4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SCUBE1Q8IWY4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SCUBE1Q8IWY4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.69
SCUBE1Q8IWY4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
SCUBE1Q8IWY4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SCUBE1Q8IWY4 WASH5P-204ENST00000632292 975 ntBASIC25.57■■□□□ 1.68
SCUBE1Q8IWY4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCUBE1Q8IWY4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCUBE1Q8IWY4 SUZ12P1-203ENST00000578195 985 ntBASIC25.56■■□□□ 1.68
SCUBE1Q8IWY4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SCUBE1Q8IWY4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SCUBE1Q8IWY4 AL121749.1-202ENST00000609313 2153 ntBASIC25.55■■□□□ 1.68
SCUBE1Q8IWY4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.55■■□□□ 1.68
SCUBE1Q8IWY4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCUBE1Q8IWY4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE1Q8IWY4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE1Q8IWY4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SCUBE1Q8IWY4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.54■■□□□ 1.68
SCUBE1Q8IWY4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE1Q8IWY4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCUBE1Q8IWY4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SCUBE1Q8IWY4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SCUBE1Q8IWY4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SCUBE1Q8IWY4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCUBE1Q8IWY4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCUBE1Q8IWY4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.52■■□□□ 1.68
SCUBE1Q8IWY4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCUBE1Q8IWY4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCUBE1Q8IWY4 AC135731.1-201ENST00000569415 2548 ntBASIC25.51■■□□□ 1.67
SCUBE1Q8IWY4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SCUBE1Q8IWY4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCUBE1Q8IWY4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.5■■□□□ 1.67
SCUBE1Q8IWY4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SCUBE1Q8IWY4 AL135925.1-201ENST00000605920 1701 ntBASIC25.5■■□□□ 1.67
SCUBE1Q8IWY4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCUBE1Q8IWY4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCUBE1Q8IWY4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.48■■□□□ 1.67
SCUBE1Q8IWY4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SCUBE1Q8IWY4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCUBE1Q8IWY4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
SCUBE1Q8IWY4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.47■■□□□ 1.67
SCUBE1Q8IWY4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCUBE1Q8IWY4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCUBE1Q8IWY4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCUBE1Q8IWY4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
SCUBE1Q8IWY4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCUBE1Q8IWY4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.45■■□□□ 1.66
SCUBE1Q8IWY4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCUBE1Q8IWY4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SCUBE1Q8IWY4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SCUBE1Q8IWY4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms