Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LINC00346Q8IVM7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.18■■□□□ 1.3
LINC00346Q8IVM7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LINC00346Q8IVM7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LINC00346Q8IVM7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LINC00346Q8IVM7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.17■■□□□ 1.3
LINC00346Q8IVM7 AC010864.1-201ENST00000609407 1511 ntBASIC23.17■■□□□ 1.3
LINC00346Q8IVM7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.16■■□□□ 1.3
LINC00346Q8IVM7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LINC00346Q8IVM7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
LINC00346Q8IVM7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LINC00346Q8IVM7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LINC00346Q8IVM7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LINC00346Q8IVM7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LINC00346Q8IVM7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LINC00346Q8IVM7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LINC00346Q8IVM7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LINC00346Q8IVM7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LINC00346Q8IVM7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
LINC00346Q8IVM7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.13■■□□□ 1.29
LINC00346Q8IVM7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.13■■□□□ 1.29
LINC00346Q8IVM7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LINC00346Q8IVM7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LINC00346Q8IVM7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LINC00346Q8IVM7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.12■■□□□ 1.29
LINC00346Q8IVM7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
LINC00346Q8IVM7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LINC00346Q8IVM7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LINC00346Q8IVM7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LINC00346Q8IVM7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
LINC00346Q8IVM7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LINC00346Q8IVM7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LINC00346Q8IVM7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LINC00346Q8IVM7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LINC00346Q8IVM7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LINC00346Q8IVM7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LINC00346Q8IVM7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LINC00346Q8IVM7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.08■■□□□ 1.29
LINC00346Q8IVM7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LINC00346Q8IVM7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
LINC00346Q8IVM7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
LINC00346Q8IVM7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LINC00346Q8IVM7 AL139393.2-201ENST00000608721 2025 ntBASIC23.07■■□□□ 1.28
LINC00346Q8IVM7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LINC00346Q8IVM7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LINC00346Q8IVM7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LINC00346Q8IVM7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
LINC00346Q8IVM7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LINC00346Q8IVM7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LINC00346Q8IVM7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LINC00346Q8IVM7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00346Q8IVM7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
LINC00346Q8IVM7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00346Q8IVM7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.04■■□□□ 1.28
LINC00346Q8IVM7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00346Q8IVM7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.03■■□□□ 1.28
LINC00346Q8IVM7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LINC00346Q8IVM7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LINC00346Q8IVM7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LINC00346Q8IVM7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.02■■□□□ 1.28
LINC00346Q8IVM7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LINC00346Q8IVM7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.01■■□□□ 1.27
LINC00346Q8IVM7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LINC00346Q8IVM7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LINC00346Q8IVM7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LINC00346Q8IVM7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.99■■□□□ 1.27
LINC00346Q8IVM7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LINC00346Q8IVM7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.98■■□□□ 1.27
LINC00346Q8IVM7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LINC00346Q8IVM7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LINC00346Q8IVM7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
LINC00346Q8IVM7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LINC00346Q8IVM7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LINC00346Q8IVM7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LINC00346Q8IVM7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.96■■□□□ 1.27
LINC00346Q8IVM7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
LINC00346Q8IVM7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LINC00346Q8IVM7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.95■■□□□ 1.26
LINC00346Q8IVM7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
LINC00346Q8IVM7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LINC00346Q8IVM7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.95■■□□□ 1.26
LINC00346Q8IVM7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LINC00346Q8IVM7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LINC00346Q8IVM7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LINC00346Q8IVM7 MIR762-201ENST00000390236 83 ntBASIC22.94■■□□□ 1.26
LINC00346Q8IVM7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LINC00346Q8IVM7 SUZ12P1-203ENST00000578195 985 ntBASIC22.93■■□□□ 1.26
LINC00346Q8IVM7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
LINC00346Q8IVM7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.92■■□□□ 1.26
LINC00346Q8IVM7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.92■■□□□ 1.26
LINC00346Q8IVM7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
LINC00346Q8IVM7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
LINC00346Q8IVM7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.91■■□□□ 1.26
LINC00346Q8IVM7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LINC00346Q8IVM7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.91■■□□□ 1.26
LINC00346Q8IVM7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.91■■□□□ 1.26
LINC00346Q8IVM7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LINC00346Q8IVM7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LINC00346Q8IVM7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
LINC00346Q8IVM7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms