Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.12■■□□□ 1.61
NIPAL1Q6NVV3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NIPAL1Q6NVV3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
NIPAL1Q6NVV3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NIPAL1Q6NVV3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NIPAL1Q6NVV3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NIPAL1Q6NVV3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NIPAL1Q6NVV3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NIPAL1Q6NVV3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.09■■□□□ 1.61
NIPAL1Q6NVV3 AC044849.2-201ENST00000606596 710 ntBASIC25.09■■□□□ 1.61
NIPAL1Q6NVV3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NIPAL1Q6NVV3 AC087741.3-201ENST00000624270 1347 ntBASIC25.09■■□□□ 1.61
NIPAL1Q6NVV3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NIPAL1Q6NVV3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NIPAL1Q6NVV3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NIPAL1Q6NVV3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.08■■□□□ 1.6
NIPAL1Q6NVV3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NIPAL1Q6NVV3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NIPAL1Q6NVV3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
NIPAL1Q6NVV3 ABCB10P3-201ENST00000561950 2166 ntBASIC25.06■■□□□ 1.6
NIPAL1Q6NVV3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NIPAL1Q6NVV3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.06■■□□□ 1.6
NIPAL1Q6NVV3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NIPAL1Q6NVV3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.05■■□□□ 1.6
NIPAL1Q6NVV3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.05■■□□□ 1.6
NIPAL1Q6NVV3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NIPAL1Q6NVV3 RPS2P35-201ENST00000443417 897 ntBASIC25.04■■□□□ 1.6
NIPAL1Q6NVV3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.04■■□□□ 1.6
NIPAL1Q6NVV3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
NIPAL1Q6NVV3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NIPAL1Q6NVV3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NIPAL1Q6NVV3 AC108673.1-201ENST00000510422 1159 ntBASIC25.02■■□□□ 1.6
NIPAL1Q6NVV3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NIPAL1Q6NVV3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
NIPAL1Q6NVV3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25■■□□□ 1.59
NIPAL1Q6NVV3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NIPAL1Q6NVV3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NIPAL1Q6NVV3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.98■■□□□ 1.59
NIPAL1Q6NVV3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
NIPAL1Q6NVV3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
NIPAL1Q6NVV3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.97■■□□□ 1.59
NIPAL1Q6NVV3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
NIPAL1Q6NVV3 AL135925.1-201ENST00000605920 1701 ntBASIC24.97■■□□□ 1.59
NIPAL1Q6NVV3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
NIPAL1Q6NVV3 ABCB10P1-201ENST00000614297 2181 ntBASIC24.96■■□□□ 1.59
NIPAL1Q6NVV3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
NIPAL1Q6NVV3 AC010864.1-201ENST00000609407 1511 ntBASIC24.96■■□□□ 1.59
NIPAL1Q6NVV3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NIPAL1Q6NVV3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NIPAL1Q6NVV3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NIPAL1Q6NVV3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NIPAL1Q6NVV3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
NIPAL1Q6NVV3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NIPAL1Q6NVV3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NIPAL1Q6NVV3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NIPAL1Q6NVV3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NIPAL1Q6NVV3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
NIPAL1Q6NVV3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NIPAL1Q6NVV3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
NIPAL1Q6NVV3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.92■■□□□ 1.58
NIPAL1Q6NVV3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.92■■□□□ 1.58
NIPAL1Q6NVV3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NIPAL1Q6NVV3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NIPAL1Q6NVV3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NIPAL1Q6NVV3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
NIPAL1Q6NVV3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NIPAL1Q6NVV3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NIPAL1Q6NVV3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NIPAL1Q6NVV3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.88■■□□□ 1.57
NIPAL1Q6NVV3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
NIPAL1Q6NVV3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NIPAL1Q6NVV3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NIPAL1Q6NVV3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NIPAL1Q6NVV3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
NIPAL1Q6NVV3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
NIPAL1Q6NVV3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
NIPAL1Q6NVV3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.85■■□□□ 1.57
NIPAL1Q6NVV3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
NIPAL1Q6NVV3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NIPAL1Q6NVV3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NIPAL1Q6NVV3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.83■■□□□ 1.57
NIPAL1Q6NVV3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
NIPAL1Q6NVV3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.82■■□□□ 1.56
NIPAL1Q6NVV3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
NIPAL1Q6NVV3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NIPAL1Q6NVV3 MIR6090-201ENST00000622481 60 ntBASIC24.81■■□□□ 1.56
NIPAL1Q6NVV3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NIPAL1Q6NVV3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.81■■□□□ 1.56
NIPAL1Q6NVV3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.8■■□□□ 1.56
NIPAL1Q6NVV3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
NIPAL1Q6NVV3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
NIPAL1Q6NVV3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
NIPAL1Q6NVV3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 1298.5 ms