Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.43■■□□□ 1.34
HIST2H2BCQ6DN03 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HIST2H2BCQ6DN03 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HIST2H2BCQ6DN03 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HIST2H2BCQ6DN03 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.42■■□□□ 1.34
HIST2H2BCQ6DN03 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
HIST2H2BCQ6DN03 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HIST2H2BCQ6DN03 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
HIST2H2BCQ6DN03 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HIST2H2BCQ6DN03 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
HIST2H2BCQ6DN03 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
HIST2H2BCQ6DN03 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HIST2H2BCQ6DN03 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
HIST2H2BCQ6DN03 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HIST2H2BCQ6DN03 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.37■■□□□ 1.33
HIST2H2BCQ6DN03 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
HIST2H2BCQ6DN03 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.37■■□□□ 1.33
HIST2H2BCQ6DN03 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HIST2H2BCQ6DN03 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.36■■□□□ 1.33
HIST2H2BCQ6DN03 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HIST2H2BCQ6DN03 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HIST2H2BCQ6DN03 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HIST2H2BCQ6DN03 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HIST2H2BCQ6DN03 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.35■■□□□ 1.33
HIST2H2BCQ6DN03 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HIST2H2BCQ6DN03 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HIST2H2BCQ6DN03 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HIST2H2BCQ6DN03 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.33■■□□□ 1.33
HIST2H2BCQ6DN03 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HIST2H2BCQ6DN03 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.31■■□□□ 1.32
HIST2H2BCQ6DN03 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
HIST2H2BCQ6DN03 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HIST2H2BCQ6DN03 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HIST2H2BCQ6DN03 AC019069.1-201ENST00000610008 1333 ntBASIC23.29■■□□□ 1.32
HIST2H2BCQ6DN03 RARRES2P1-201ENST00000474487 481 ntBASIC23.28■■□□□ 1.32
HIST2H2BCQ6DN03 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HIST2H2BCQ6DN03 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
HIST2H2BCQ6DN03 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HIST2H2BCQ6DN03 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.26■■□□□ 1.31
HIST2H2BCQ6DN03 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.26■■□□□ 1.31
HIST2H2BCQ6DN03 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HIST2H2BCQ6DN03 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HIST2H2BCQ6DN03 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
HIST2H2BCQ6DN03 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
HIST2H2BCQ6DN03 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
HIST2H2BCQ6DN03 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.24■■□□□ 1.31
HIST2H2BCQ6DN03 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.24■■□□□ 1.31
HIST2H2BCQ6DN03 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
HIST2H2BCQ6DN03 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HIST2H2BCQ6DN03 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.23■■□□□ 1.31
HIST2H2BCQ6DN03 AC022413.1-201ENST00000624602 984 ntBASIC23.23■■□□□ 1.31
HIST2H2BCQ6DN03 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HIST2H2BCQ6DN03 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
HIST2H2BCQ6DN03 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
HIST2H2BCQ6DN03 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HIST2H2BCQ6DN03 AL592295.1-201ENST00000400984 884 ntBASIC23.21■■□□□ 1.31
HIST2H2BCQ6DN03 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HIST2H2BCQ6DN03 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.2■■□□□ 1.3
HIST2H2BCQ6DN03 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HIST2H2BCQ6DN03 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HIST2H2BCQ6DN03 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.19■■□□□ 1.3
HIST2H2BCQ6DN03 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HIST2H2BCQ6DN03 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIST2H2BCQ6DN03 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIST2H2BCQ6DN03 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.18■■□□□ 1.3
HIST2H2BCQ6DN03 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.18■■□□□ 1.3
HIST2H2BCQ6DN03 U85056.1-201ENST00000616429 682 ntBASIC23.18■■□□□ 1.3
HIST2H2BCQ6DN03 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIST2H2BCQ6DN03 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIST2H2BCQ6DN03 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.16■■□□□ 1.3
HIST2H2BCQ6DN03 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HIST2H2BCQ6DN03 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.15■■□□□ 1.3
HIST2H2BCQ6DN03 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HIST2H2BCQ6DN03 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.12■■□□□ 1.29
HIST2H2BCQ6DN03 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.12■■□□□ 1.29
HIST2H2BCQ6DN03 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.11■■□□□ 1.29
HIST2H2BCQ6DN03 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.1■■□□□ 1.29
HIST2H2BCQ6DN03 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
HIST2H2BCQ6DN03 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
HIST2H2BCQ6DN03 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIST2H2BCQ6DN03 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC23.09■■□□□ 1.29
HIST2H2BCQ6DN03 AC004987.1-201ENST00000428627 508 ntBASIC23.08■■□□□ 1.29
HIST2H2BCQ6DN03 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HIST2H2BCQ6DN03 TSPY13P-201ENST00000338964 914 ntBASIC23.07■■□□□ 1.28
HIST2H2BCQ6DN03 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.07■■□□□ 1.28
HIST2H2BCQ6DN03 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HIST2H2BCQ6DN03 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.06■■□□□ 1.28
HIST2H2BCQ6DN03 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HIST2H2BCQ6DN03 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.05■■□□□ 1.28
HIST2H2BCQ6DN03 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.04■■□□□ 1.28
HIST2H2BCQ6DN03 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.04■■□□□ 1.28
HIST2H2BCQ6DN03 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HIST2H2BCQ6DN03 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HIST2H2BCQ6DN03 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.03■■□□□ 1.28
HIST2H2BCQ6DN03 ATP5G2P3-201ENST00000429083 425 ntBASIC23.02■■□□□ 1.28
HIST2H2BCQ6DN03 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.01■■□□□ 1.27
HIST2H2BCQ6DN03 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HIST2H2BCQ6DN03 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HIST2H2BCQ6DN03 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.99■■□□□ 1.27
HIST2H2BCQ6DN03 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms