Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01554Q52M75 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LINC01554Q52M75 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01554Q52M75 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01554Q52M75 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01554Q52M75 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01554Q52M75 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01554Q52M75 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
LINC01554Q52M75 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01554Q52M75 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01554Q52M75 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01554Q52M75 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01554Q52M75 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01554Q52M75 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC01554Q52M75 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01554Q52M75 CREM-210ENST00000374721 2020 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01554Q52M75 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01554Q52M75 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01554Q52M75 ABCB10P3-201ENST00000561950 2166 ntBASIC13.08□□□□□ -0.31
LINC01554Q52M75 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01554Q52M75 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01554Q52M75 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01554Q52M75 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01554Q52M75 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01554Q52M75 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01554Q52M75 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01554Q52M75 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01554Q52M75 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC01554Q52M75 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01554Q52M75 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LINC01554Q52M75 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01554Q52M75 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01554Q52M75 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01554Q52M75 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC01554Q52M75 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01554Q52M75 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LINC01554Q52M75 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC01554Q52M75 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01554Q52M75 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LINC01554Q52M75 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC01554Q52M75 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC01554Q52M75 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LINC01554Q52M75 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC01554Q52M75 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC01554Q52M75 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01554Q52M75 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC01554Q52M75 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LINC01554Q52M75 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC01554Q52M75 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC01554Q52M75 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01554Q52M75 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LINC01554Q52M75 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01554Q52M75 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01554Q52M75 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01554Q52M75 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01554Q52M75 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01554Q52M75 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01554Q52M75 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC13□□□□□ -0.33
LINC01554Q52M75 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01554Q52M75 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01554Q52M75 AC145285.7-201ENST00000614819 1539 ntBASIC13□□□□□ -0.33
LINC01554Q52M75 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01554Q52M75 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01554Q52M75 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01554Q52M75 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01554Q52M75 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01554Q52M75 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01554Q52M75 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC01554Q52M75 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01554Q52M75 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01554Q52M75 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
LINC01554Q52M75 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01554Q52M75 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01554Q52M75 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01554Q52M75 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01554Q52M75 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01554Q52M75 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LINC01554Q52M75 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01554Q52M75 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LINC01554Q52M75 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01554Q52M75 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01554Q52M75 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01554Q52M75 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01554Q52M75 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01554Q52M75 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01554Q52M75 LINC00543-201ENST00000567234 1845 ntBASIC12.95□□□□□ -0.34
LINC01554Q52M75 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01554Q52M75 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01554Q52M75 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
LINC01554Q52M75 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms