Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 WASH5P-204ENST00000632292 975 ntBASIC22.66■■□□□ 1.22
SEC61A1P61619 RPS2P35-201ENST00000443417 897 ntBASIC22.65■■□□□ 1.22
SEC61A1P61619 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
SEC61A1P61619 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SEC61A1P61619 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SEC61A1P61619 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.63■■□□□ 1.21
SEC61A1P61619 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.63■■□□□ 1.21
SEC61A1P61619 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.62■■□□□ 1.21
SEC61A1P61619 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.61■■□□□ 1.21
SEC61A1P61619 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.61■■□□□ 1.21
SEC61A1P61619 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.61■■□□□ 1.21
SEC61A1P61619 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SEC61A1P61619 AC135731.1-201ENST00000569415 2548 ntBASIC22.61■■□□□ 1.21
SEC61A1P61619 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.61■■□□□ 1.21
SEC61A1P61619 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SEC61A1P61619 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.6■■□□□ 1.21
SEC61A1P61619 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SEC61A1P61619 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.6■■□□□ 1.21
SEC61A1P61619 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SEC61A1P61619 AL162393.1-201ENST00000437852 946 ntBASIC22.59■■□□□ 1.21
SEC61A1P61619 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SEC61A1P61619 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SEC61A1P61619 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SEC61A1P61619 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
SEC61A1P61619 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.57■■□□□ 1.2
SEC61A1P61619 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.56■■□□□ 1.2
SEC61A1P61619 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.56■■□□□ 1.2
SEC61A1P61619 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SEC61A1P61619 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEC61A1P61619 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEC61A1P61619 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SEC61A1P61619 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEC61A1P61619 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SEC61A1P61619 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEC61A1P61619 MIR762-201ENST00000390236 83 ntBASIC22.53■■□□□ 1.2
SEC61A1P61619 AP006261.1-201ENST00000584783 668 ntBASIC22.53■■□□□ 1.2
SEC61A1P61619 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEC61A1P61619 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEC61A1P61619 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEC61A1P61619 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEC61A1P61619 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEC61A1P61619 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
SEC61A1P61619 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.51■■□□□ 1.19
SEC61A1P61619 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEC61A1P61619 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEC61A1P61619 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEC61A1P61619 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.5■■□□□ 1.19
SEC61A1P61619 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SEC61A1P61619 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SEC61A1P61619 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
SEC61A1P61619 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.49■■□□□ 1.19
SEC61A1P61619 AC142086.6-201ENST00000621154 1765 ntBASIC22.49■■□□□ 1.19
SEC61A1P61619 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.49■■□□□ 1.19
SEC61A1P61619 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.49■■□□□ 1.19
SEC61A1P61619 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SEC61A1P61619 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.48■■□□□ 1.19
SEC61A1P61619 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SEC61A1P61619 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.48■■□□□ 1.19
SEC61A1P61619 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SEC61A1P61619 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.47■■□□□ 1.19
SEC61A1P61619 DUX4L28-201ENST00000623687 678 ntBASIC22.47■■□□□ 1.19
SEC61A1P61619 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SEC61A1P61619 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SEC61A1P61619 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SEC61A1P61619 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SEC61A1P61619 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
SEC61A1P61619 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 MIR3665-201ENST00000578708 105 ntBASIC22.44■■□□□ 1.18
SEC61A1P61619 AC005559.1-201ENST00000589661 871 ntBASIC22.44■■□□□ 1.18
SEC61A1P61619 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.43■■□□□ 1.18
SEC61A1P61619 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SEC61A1P61619 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEC61A1P61619 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SEC61A1P61619 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEC61A1P61619 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SEC61A1P61619 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
SEC61A1P61619 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SEC61A1P61619 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SEC61A1P61619 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEC61A1P61619 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEC61A1P61619 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.39■■□□□ 1.18
SEC61A1P61619 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SEC61A1P61619 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SEC61A1P61619 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms