Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKS2P33552 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKS2P33552 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKS2P33552 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.24■□□□□ 0.67
CKS2P33552 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKS2P33552 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CKS2P33552 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CKS2P33552 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.22■□□□□ 0.67
CKS2P33552 AL121749.1-202ENST00000609313 2153 ntBASIC19.22■□□□□ 0.67
CKS2P33552 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CKS2P33552 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKS2P33552 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CKS2P33552 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKS2P33552 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKS2P33552 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS2P33552 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKS2P33552 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKS2P33552 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKS2P33552 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CKS2P33552 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.18■□□□□ 0.66
CKS2P33552 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CKS2P33552 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKS2P33552 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CKS2P33552 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKS2P33552 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKS2P33552 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.15■□□□□ 0.66
CKS2P33552 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKS2P33552 DRD5P2-201ENST00000421395 2012 ntBASIC19.15■□□□□ 0.66
CKS2P33552 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKS2P33552 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CKS2P33552 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKS2P33552 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CKS2P33552 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKS2P33552 AL139393.2-201ENST00000608721 2025 ntBASIC19.13■□□□□ 0.65
CKS2P33552 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKS2P33552 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.12■□□□□ 0.65
CKS2P33552 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS2P33552 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.12■□□□□ 0.65
CKS2P33552 AC135731.1-201ENST00000569415 2548 ntBASIC19.12■□□□□ 0.65
CKS2P33552 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CKS2P33552 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKS2P33552 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.11■□□□□ 0.65
CKS2P33552 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CKS2P33552 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CKS2P33552 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CKS2P33552 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.1■□□□□ 0.65
CKS2P33552 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.1■□□□□ 0.65
CKS2P33552 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CKS2P33552 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS2P33552 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CKS2P33552 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CKS2P33552 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKS2P33552 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CKS2P33552 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CKS2P33552 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CKS2P33552 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CKS2P33552 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKS2P33552 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CKS2P33552 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CKS2P33552 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CKS2P33552 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKS2P33552 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CKS2P33552 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CKS2P33552 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CKS2P33552 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CKS2P33552 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.05■□□□□ 0.64
CKS2P33552 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.05■□□□□ 0.64
CKS2P33552 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKS2P33552 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKS2P33552 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CKS2P33552 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CKS2P33552 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CKS2P33552 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.03■□□□□ 0.64
CKS2P33552 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CKS2P33552 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CKS2P33552 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CKS2P33552 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.01■□□□□ 0.63
CKS2P33552 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms