Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
NPHS1O60500 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
NPHS1O60500 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.66■■□□□ 1.7
NPHS1O60500 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NPHS1O60500 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NPHS1O60500 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
NPHS1O60500 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NPHS1O60500 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
NPHS1O60500 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.63■■□□□ 1.69
NPHS1O60500 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.62■■□□□ 1.69
NPHS1O60500 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NPHS1O60500 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
NPHS1O60500 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NPHS1O60500 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NPHS1O60500 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NPHS1O60500 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.61■■□□□ 1.69
NPHS1O60500 AC010864.1-201ENST00000609407 1511 ntBASIC25.61■■□□□ 1.69
NPHS1O60500 DRD5P2-201ENST00000421395 2012 ntBASIC25.61■■□□□ 1.69
NPHS1O60500 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
NPHS1O60500 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NPHS1O60500 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.59■■□□□ 1.69
NPHS1O60500 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NPHS1O60500 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.58■■□□□ 1.68
NPHS1O60500 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPHS1O60500 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
NPHS1O60500 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
NPHS1O60500 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPHS1O60500 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPHS1O60500 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPHS1O60500 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NPHS1O60500 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
NPHS1O60500 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
NPHS1O60500 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NPHS1O60500 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.55■■□□□ 1.68
NPHS1O60500 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
NPHS1O60500 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NPHS1O60500 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NPHS1O60500 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
NPHS1O60500 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.53■■□□□ 1.68
NPHS1O60500 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NPHS1O60500 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NPHS1O60500 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.51■■□□□ 1.68
NPHS1O60500 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NPHS1O60500 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NPHS1O60500 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NPHS1O60500 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
NPHS1O60500 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.5■■□□□ 1.67
NPHS1O60500 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
NPHS1O60500 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NPHS1O60500 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.47■■□□□ 1.67
NPHS1O60500 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NPHS1O60500 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.46■■□□□ 1.67
NPHS1O60500 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
NPHS1O60500 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
NPHS1O60500 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
NPHS1O60500 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NPHS1O60500 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
NPHS1O60500 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.43■■□□□ 1.66
NPHS1O60500 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPHS1O60500 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPHS1O60500 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPHS1O60500 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.41■■□□□ 1.66
NPHS1O60500 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NPHS1O60500 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.4■■□□□ 1.66
NPHS1O60500 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
NPHS1O60500 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
NPHS1O60500 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.4■■□□□ 1.66
NPHS1O60500 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.39■■□□□ 1.66
NPHS1O60500 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NPHS1O60500 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHS1O60500 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHS1O60500 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
NPHS1O60500 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NPHS1O60500 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHS1O60500 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHS1O60500 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.38■■□□□ 1.65
NPHS1O60500 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
NPHS1O60500 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHS1O60500 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.37■■□□□ 1.65
NPHS1O60500 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHS1O60500 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHS1O60500 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.36■■□□□ 1.65
NPHS1O60500 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHS1O60500 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHS1O60500 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
NPHS1O60500 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHS1O60500 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHS1O60500 AP004833.2-201ENST00000532228 1454 ntBASIC25.35■■□□□ 1.65
NPHS1O60500 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHS1O60500 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHS1O60500 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHS1O60500 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NPHS1O60500 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHS1O60500 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHS1O60500 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NPHS1O60500 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NPHS1O60500 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
NPHS1O60500 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
NPHS1O60500 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NPHS1O60500 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms