Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RNF113AO15541 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.81■■■□□ 2.68
RNF113AO15541 AC044849.2-201ENST00000606596 710 ntBASIC31.81■■■□□ 2.68
RNF113AO15541 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.8■■■□□ 2.68
RNF113AO15541 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RNF113AO15541 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RNF113AO15541 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RNF113AO15541 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
RNF113AO15541 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
RNF113AO15541 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RNF113AO15541 ST7-AS1-201ENST00000456775 1889 ntBASIC31.77■■■□□ 2.68
RNF113AO15541 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
RNF113AO15541 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RNF113AO15541 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RNF113AO15541 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
RNF113AO15541 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RNF113AO15541 AC108673.1-201ENST00000510422 1159 ntBASIC31.75■■■□□ 2.67
RNF113AO15541 MIR6090-201ENST00000622481 60 ntBASIC31.75■■■□□ 2.67
RNF113AO15541 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
RNF113AO15541 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.74■■■□□ 2.67
RNF113AO15541 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
RNF113AO15541 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RNF113AO15541 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
RNF113AO15541 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RNF113AO15541 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
RNF113AO15541 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RNF113AO15541 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
RNF113AO15541 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RNF113AO15541 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
RNF113AO15541 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.68■■■□□ 2.66
RNF113AO15541 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RNF113AO15541 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RNF113AO15541 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
RNF113AO15541 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.67■■■□□ 2.66
RNF113AO15541 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RNF113AO15541 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RNF113AO15541 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.65■■■□□ 2.66
RNF113AO15541 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
RNF113AO15541 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.64■■■□□ 2.66
RNF113AO15541 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.63■■■□□ 2.65
RNF113AO15541 ABCB10P1-201ENST00000614297 2181 ntBASIC31.63■■■□□ 2.65
RNF113AO15541 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RNF113AO15541 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RNF113AO15541 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RNF113AO15541 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.6■■■□□ 2.65
RNF113AO15541 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
RNF113AO15541 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RNF113AO15541 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.57■■■□□ 2.64
RNF113AO15541 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RNF113AO15541 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RNF113AO15541 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
RNF113AO15541 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.55■■■□□ 2.64
RNF113AO15541 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
RNF113AO15541 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.54■■■□□ 2.64
RNF113AO15541 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
RNF113AO15541 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RNF113AO15541 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RNF113AO15541 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
RNF113AO15541 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RNF113AO15541 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RNF113AO15541 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.52■■■□□ 2.64
RNF113AO15541 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RNF113AO15541 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.51■■■□□ 2.63
RNF113AO15541 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.51■■■□□ 2.63
RNF113AO15541 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
RNF113AO15541 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RNF113AO15541 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
RNF113AO15541 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.49■■■□□ 2.63
RNF113AO15541 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RNF113AO15541 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RNF113AO15541 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RNF113AO15541 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
RNF113AO15541 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RNF113AO15541 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.46■■■□□ 2.63
RNF113AO15541 AC127502.1-201ENST00000399971 1502 ntBASIC31.46■■■□□ 2.63
RNF113AO15541 AC021231.2-201ENST00000594613 730 ntBASIC31.46■■■□□ 2.63
RNF113AO15541 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.45■■■□□ 2.63
RNF113AO15541 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RNF113AO15541 DUX4L29-201ENST00000425409 679 ntBASIC31.45■■■□□ 2.63
RNF113AO15541 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RNF113AO15541 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
RNF113AO15541 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
RNF113AO15541 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RNF113AO15541 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
RNF113AO15541 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.42■■■□□ 2.62
RNF113AO15541 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RNF113AO15541 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
RNF113AO15541 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.42■■■□□ 2.62
RNF113AO15541 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.42■■■□□ 2.62
RNF113AO15541 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
RNF113AO15541 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RNF113AO15541 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
RNF113AO15541 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RNF113AO15541 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.41■■■□□ 2.62
RNF113AO15541 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
RNF113AO15541 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.4■■■□□ 2.62
RNF113AO15541 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.4■■■□□ 2.62
RNF113AO15541 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.4■■■□□ 2.62
RNF113AO15541 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.4■■■□□ 2.62
RNF113AO15541 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms