Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRANK1O15050 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.54■■■□□ 2.16
TRANK1O15050 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TRANK1O15050 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.53■■■□□ 2.16
TRANK1O15050 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.53■■■□□ 2.16
TRANK1O15050 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRANK1O15050 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
TRANK1O15050 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRANK1O15050 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRANK1O15050 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRANK1O15050 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRANK1O15050 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
TRANK1O15050 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TRANK1O15050 GPX1-201ENST00000419349 1106 ntBASIC28.47■■■□□ 2.15
TRANK1O15050 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.47■■■□□ 2.15
TRANK1O15050 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
TRANK1O15050 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TRANK1O15050 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.15
TRANK1O15050 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.45■■■□□ 2.15
TRANK1O15050 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
TRANK1O15050 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TRANK1O15050 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.45■■■□□ 2.14
TRANK1O15050 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
TRANK1O15050 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRANK1O15050 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
TRANK1O15050 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.38■■■□□ 2.13
TRANK1O15050 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.38■■■□□ 2.13
TRANK1O15050 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
TRANK1O15050 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRANK1O15050 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRANK1O15050 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
TRANK1O15050 NTF6A-201ENST00000591175 560 ntBASIC28.36■■■□□ 2.13
TRANK1O15050 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRANK1O15050 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
TRANK1O15050 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.35■■■□□ 2.13
TRANK1O15050 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.35■■■□□ 2.13
TRANK1O15050 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.35■■■□□ 2.13
TRANK1O15050 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRANK1O15050 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRANK1O15050 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRANK1O15050 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.33■■■□□ 2.13
TRANK1O15050 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRANK1O15050 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.33■■■□□ 2.13
TRANK1O15050 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.32■■■□□ 2.12
TRANK1O15050 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRANK1O15050 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRANK1O15050 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.31■■■□□ 2.12
TRANK1O15050 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.3■■■□□ 2.12
TRANK1O15050 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.29■■■□□ 2.12
TRANK1O15050 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
TRANK1O15050 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.28■■■□□ 2.12
TRANK1O15050 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRANK1O15050 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRANK1O15050 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.26■■■□□ 2.11
TRANK1O15050 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
TRANK1O15050 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRANK1O15050 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
TRANK1O15050 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.25■■■□□ 2.11
TRANK1O15050 AC012354.3-201ENST00000623734 483 ntBASIC28.25■■■□□ 2.11
TRANK1O15050 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRANK1O15050 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.24■■■□□ 2.11
TRANK1O15050 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRANK1O15050 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
TRANK1O15050 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
TRANK1O15050 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRANK1O15050 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
TRANK1O15050 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.2■■■□□ 2.11
TRANK1O15050 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.2■■■□□ 2.11
TRANK1O15050 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.2■■■□□ 2.1
TRANK1O15050 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRANK1O15050 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.19■■■□□ 2.1
TRANK1O15050 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.19■■■□□ 2.1
TRANK1O15050 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.18■■■□□ 2.1
TRANK1O15050 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRANK1O15050 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
TRANK1O15050 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
TRANK1O15050 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRANK1O15050 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.17■■■□□ 2.1
TRANK1O15050 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
TRANK1O15050 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
TRANK1O15050 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.15■■■□□ 2.1
TRANK1O15050 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRANK1O15050 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.14■■■□□ 2.1
TRANK1O15050 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
TRANK1O15050 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TRANK1O15050 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.12■■■□□ 2.09
TRANK1O15050 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRANK1O15050 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms