Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TMEM88BA6NKF7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
TMEM88BA6NKF7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.83■■■□□ 2.69
TMEM88BA6NKF7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TMEM88BA6NKF7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TMEM88BA6NKF7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
TMEM88BA6NKF7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
TMEM88BA6NKF7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TMEM88BA6NKF7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TMEM88BA6NKF7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TMEM88BA6NKF7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
TMEM88BA6NKF7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
TMEM88BA6NKF7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
TMEM88BA6NKF7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.78■■■□□ 2.68
TMEM88BA6NKF7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMEM88BA6NKF7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMEM88BA6NKF7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.77■■■□□ 2.68
TMEM88BA6NKF7 AC018358.1-201ENST00000631079 1402 ntBASIC31.75■■■□□ 2.67
TMEM88BA6NKF7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.75■■■□□ 2.67
TMEM88BA6NKF7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TMEM88BA6NKF7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.75■■■□□ 2.67
TMEM88BA6NKF7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.73■■■□□ 2.67
TMEM88BA6NKF7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
TMEM88BA6NKF7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.73■■■□□ 2.67
TMEM88BA6NKF7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.72■■■□□ 2.67
TMEM88BA6NKF7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
TMEM88BA6NKF7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
TMEM88BA6NKF7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
TMEM88BA6NKF7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
TMEM88BA6NKF7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
TMEM88BA6NKF7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TMEM88BA6NKF7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TMEM88BA6NKF7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TMEM88BA6NKF7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
TMEM88BA6NKF7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.67■■■□□ 2.66
TMEM88BA6NKF7 AL033527.3-201ENST00000566366 1196 ntBASIC31.66■■■□□ 2.66
TMEM88BA6NKF7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TMEM88BA6NKF7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
TMEM88BA6NKF7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
TMEM88BA6NKF7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TMEM88BA6NKF7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
TMEM88BA6NKF7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TMEM88BA6NKF7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TMEM88BA6NKF7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
TMEM88BA6NKF7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.63■■■□□ 2.65
TMEM88BA6NKF7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.63■■■□□ 2.65
TMEM88BA6NKF7 AC008813.1-201ENST00000536597 885 ntBASIC31.62■■■□□ 2.65
TMEM88BA6NKF7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TMEM88BA6NKF7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.6■■■□□ 2.65
TMEM88BA6NKF7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
TMEM88BA6NKF7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
TMEM88BA6NKF7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TMEM88BA6NKF7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TMEM88BA6NKF7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.58■■■□□ 2.65
TMEM88BA6NKF7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
TMEM88BA6NKF7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.56■■■□□ 2.64
TMEM88BA6NKF7 AC022413.1-201ENST00000624602 984 ntBASIC31.55■■■□□ 2.64
TMEM88BA6NKF7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.55■■■□□ 2.64
TMEM88BA6NKF7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
TMEM88BA6NKF7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
TMEM88BA6NKF7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.51■■■□□ 2.63
TMEM88BA6NKF7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
TMEM88BA6NKF7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TMEM88BA6NKF7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.49■■■□□ 2.63
TMEM88BA6NKF7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
TMEM88BA6NKF7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TMEM88BA6NKF7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TMEM88BA6NKF7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.46■■■□□ 2.63
TMEM88BA6NKF7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TMEM88BA6NKF7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.45■■■□□ 2.63
TMEM88BA6NKF7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TMEM88BA6NKF7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TMEM88BA6NKF7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TMEM88BA6NKF7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.43■■■□□ 2.62
TMEM88BA6NKF7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TMEM88BA6NKF7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TMEM88BA6NKF7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.4■■■□□ 2.62
TMEM88BA6NKF7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TMEM88BA6NKF7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.39■■■□□ 2.62
TMEM88BA6NKF7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.39■■■□□ 2.62
TMEM88BA6NKF7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
TMEM88BA6NKF7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.38■■■□□ 2.61
TMEM88BA6NKF7 RARRES2P1-201ENST00000474487 481 ntBASIC31.37■■■□□ 2.61
TMEM88BA6NKF7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TMEM88BA6NKF7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TMEM88BA6NKF7 U85056.1-201ENST00000616429 682 ntBASIC31.36■■■□□ 2.61
TMEM88BA6NKF7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TMEM88BA6NKF7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TMEM88BA6NKF7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.35■■■□□ 2.61
TMEM88BA6NKF7 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.35■■■□□ 2.61
TMEM88BA6NKF7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TMEM88BA6NKF7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TMEM88BA6NKF7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
TMEM88BA6NKF7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
TMEM88BA6NKF7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TMEM88BA6NKF7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TMEM88BA6NKF7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.31■■■□□ 2.6
TMEM88BA6NKF7 TSPY13P-201ENST00000338964 914 ntBASIC31.31■■■□□ 2.6
TMEM88BA6NKF7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TMEM88BA6NKF7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms