Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TCRBV4S1A1TA0A5B7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV4S1A1TA0A5B7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.01■□□□□ 0.95
TCRBV4S1A1TA0A5B7 AL161658.1-201ENST00000623641 1967 ntBASIC21.01■□□□□ 0.95
TCRBV4S1A1TA0A5B7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV4S1A1TA0A5B7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV4S1A1TA0A5B7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.01■□□□□ 0.95
TCRBV4S1A1TA0A5B7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV4S1A1TA0A5B7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21■□□□□ 0.95
TCRBV4S1A1TA0A5B7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV4S1A1TA0A5B7 ST7-AS1-201ENST00000456775 1889 ntBASIC20.99■□□□□ 0.95
TCRBV4S1A1TA0A5B7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV4S1A1TA0A5B7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV4S1A1TA0A5B7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV4S1A1TA0A5B7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.98■□□□□ 0.95
TCRBV4S1A1TA0A5B7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV4S1A1TA0A5B7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV4S1A1TA0A5B7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.98■□□□□ 0.95
TCRBV4S1A1TA0A5B7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TCRBV4S1A1TA0A5B7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV4S1A1TA0A5B7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV4S1A1TA0A5B7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV4S1A1TA0A5B7 ABHD17AP4-201ENST00000411545 909 ntBASIC20.97■□□□□ 0.95
TCRBV4S1A1TA0A5B7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV4S1A1TA0A5B7 AC139426.1-201ENST00000568218 2529 ntBASIC20.97■□□□□ 0.95
TCRBV4S1A1TA0A5B7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV4S1A1TA0A5B7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV4S1A1TA0A5B7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV4S1A1TA0A5B7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TCRBV4S1A1TA0A5B7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV4S1A1TA0A5B7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.95■□□□□ 0.94
TCRBV4S1A1TA0A5B7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBV4S1A1TA0A5B7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBV4S1A1TA0A5B7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TCRBV4S1A1TA0A5B7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
TCRBV4S1A1TA0A5B7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TCRBV4S1A1TA0A5B7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.92■□□□□ 0.94
TCRBV4S1A1TA0A5B7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV4S1A1TA0A5B7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBV4S1A1TA0A5B7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.91■□□□□ 0.94
TCRBV4S1A1TA0A5B7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV4S1A1TA0A5B7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV4S1A1TA0A5B7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV4S1A1TA0A5B7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBV4S1A1TA0A5B7 MIR7108-201ENST00000614319 87 ntBASIC20.9■□□□□ 0.94
TCRBV4S1A1TA0A5B7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TCRBV4S1A1TA0A5B7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TCRBV4S1A1TA0A5B7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
TCRBV4S1A1TA0A5B7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBV4S1A1TA0A5B7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV4S1A1TA0A5B7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.88■□□□□ 0.93
TCRBV4S1A1TA0A5B7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.88■□□□□ 0.93
TCRBV4S1A1TA0A5B7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.88■□□□□ 0.93
TCRBV4S1A1TA0A5B7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBV4S1A1TA0A5B7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV4S1A1TA0A5B7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBV4S1A1TA0A5B7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TCRBV4S1A1TA0A5B7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TCRBV4S1A1TA0A5B7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV4S1A1TA0A5B7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV4S1A1TA0A5B7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.86■□□□□ 0.93
TCRBV4S1A1TA0A5B7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV4S1A1TA0A5B7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV4S1A1TA0A5B7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV4S1A1TA0A5B7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBV4S1A1TA0A5B7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.85■□□□□ 0.93
TCRBV4S1A1TA0A5B7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.85■□□□□ 0.93
TCRBV4S1A1TA0A5B7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV4S1A1TA0A5B7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV4S1A1TA0A5B7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV4S1A1TA0A5B7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV4S1A1TA0A5B7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV4S1A1TA0A5B7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.83■□□□□ 0.93
TCRBV4S1A1TA0A5B7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV4S1A1TA0A5B7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV4S1A1TA0A5B7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV4S1A1TA0A5B7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV4S1A1TA0A5B7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TCRBV4S1A1TA0A5B7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV4S1A1TA0A5B7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV4S1A1TA0A5B7 AL135925.1-201ENST00000605920 1701 ntBASIC20.82■□□□□ 0.92
TCRBV4S1A1TA0A5B7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.82■□□□□ 0.92
TCRBV4S1A1TA0A5B7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV4S1A1TA0A5B7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV4S1A1TA0A5B7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV4S1A1TA0A5B7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TCRBV4S1A1TA0A5B7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV4S1A1TA0A5B7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV4S1A1TA0A5B7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV4S1A1TA0A5B7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV4S1A1TA0A5B7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV4S1A1TA0A5B7 DUX4L29-201ENST00000425409 679 ntBASIC20.79■□□□□ 0.92
TCRBV4S1A1TA0A5B7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.79■□□□□ 0.92
TCRBV4S1A1TA0A5B7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.79■□□□□ 0.92
TCRBV4S1A1TA0A5B7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV4S1A1TA0A5B7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV4S1A1TA0A5B7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV4S1A1TA0A5B7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV4S1A1TA0A5B7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.78■□□□□ 0.92
TCRBV4S1A1TA0A5B7 ZNRF2P2-203ENST00000454624 420 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms