Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV9-1A0A075B6T8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TRAV9-1A0A075B6T8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAV9-1A0A075B6T8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV9-1A0A075B6T8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV9-1A0A075B6T8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV9-1A0A075B6T8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV9-1A0A075B6T8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV9-1A0A075B6T8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRAV9-1A0A075B6T8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV9-1A0A075B6T8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV9-1A0A075B6T8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV9-1A0A075B6T8 AL135925.1-201ENST00000605920 1701 ntBASIC19.87■□□□□ 0.77
TRAV9-1A0A075B6T8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV9-1A0A075B6T8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TRAV9-1A0A075B6T8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV9-1A0A075B6T8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV9-1A0A075B6T8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAV9-1A0A075B6T8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV9-1A0A075B6T8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV9-1A0A075B6T8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRAV9-1A0A075B6T8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV9-1A0A075B6T8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV9-1A0A075B6T8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRAV9-1A0A075B6T8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV9-1A0A075B6T8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV9-1A0A075B6T8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV9-1A0A075B6T8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TRAV9-1A0A075B6T8 AL139393.2-201ENST00000608721 2025 ntBASIC19.8■□□□□ 0.76
TRAV9-1A0A075B6T8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV9-1A0A075B6T8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV9-1A0A075B6T8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV9-1A0A075B6T8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.8■□□□□ 0.76
TRAV9-1A0A075B6T8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV9-1A0A075B6T8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRAV9-1A0A075B6T8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV9-1A0A075B6T8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV9-1A0A075B6T8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRAV9-1A0A075B6T8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV9-1A0A075B6T8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV9-1A0A075B6T8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRAV9-1A0A075B6T8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV9-1A0A075B6T8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAV9-1A0A075B6T8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV9-1A0A075B6T8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV9-1A0A075B6T8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV9-1A0A075B6T8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRAV9-1A0A075B6T8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV9-1A0A075B6T8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV9-1A0A075B6T8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV9-1A0A075B6T8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV9-1A0A075B6T8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV9-1A0A075B6T8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV9-1A0A075B6T8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV9-1A0A075B6T8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRAV9-1A0A075B6T8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV9-1A0A075B6T8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV9-1A0A075B6T8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV9-1A0A075B6T8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRAV9-1A0A075B6T8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV9-1A0A075B6T8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV9-1A0A075B6T8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV9-1A0A075B6T8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRAV9-1A0A075B6T8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV9-1A0A075B6T8 AL449106.1-201ENST00000608517 1980 ntBASIC19.72■□□□□ 0.75
TRAV9-1A0A075B6T8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV9-1A0A075B6T8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV9-1A0A075B6T8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV9-1A0A075B6T8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV9-1A0A075B6T8 BX255925.1-201ENST00000566954 1854 ntBASIC19.7■□□□□ 0.74
TRAV9-1A0A075B6T8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV9-1A0A075B6T8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAV9-1A0A075B6T8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV9-1A0A075B6T8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV9-1A0A075B6T8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV9-1A0A075B6T8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV9-1A0A075B6T8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV9-1A0A075B6T8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV9-1A0A075B6T8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV9-1A0A075B6T8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV9-1A0A075B6T8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV9-1A0A075B6T8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV9-1A0A075B6T8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV9-1A0A075B6T8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV9-1A0A075B6T8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV9-1A0A075B6T8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAV9-1A0A075B6T8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV9-1A0A075B6T8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV9-1A0A075B6T8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV9-1A0A075B6T8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV9-1A0A075B6T8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV9-1A0A075B6T8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV9-1A0A075B6T8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV9-1A0A075B6T8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRAV9-1A0A075B6T8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV9-1A0A075B6T8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRAV9-1A0A075B6T8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV9-1A0A075B6T8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRAV9-1A0A075B6T8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV9-1A0A075B6T8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms