Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
PPP4R2Q9NY27 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 POLI-202ENST00000406285 2030 ntTSL 2 BASIC26.19■■□□□ 1.78
PPP4R2Q9NY27 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.18■■□□□ 1.78
PPP4R2Q9NY27 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 AC133561.4-201ENST00000566112 224 ntBASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.17■■□□□ 1.78
PPP4R2Q9NY27 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 AL512631.2-201ENST00000604634 923 ntBASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R2Q9NY27 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 AC011298.3-201ENST00000615796 283 ntBASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC26.15■■□□□ 1.78
PPP4R2Q9NY27 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.14■■□□□ 1.78
PPP4R2Q9NY27 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC26.14■■□□□ 1.77
PPP4R2Q9NY27 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PPP4R2Q9NY27 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
PPP4R2Q9NY27 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PPP4R2Q9NY27 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PPP4R2Q9NY27 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PPP4R2Q9NY27 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms